Difference between revisions of "PYRIDOXINE-4-OXIDASE-RXN"

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(Created page with "Category:reaction == Reaction APIGNAR-RXN == * direction: ** left-to-right * common-name: ** naringenin chalcone isomerase ** chalcone isomerase * ec-number: ** [http://en...")
(Created page with "Category:reaction == Reaction 3.6.1.17-RXN == * direction: ** left-to-right * common-name: ** bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) * ec-number: ** [http://enz...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction APIGNAR-RXN ==
+
== Reaction 3.6.1.17-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** naringenin chalcone isomerase
+
** bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)
−
** chalcone isomerase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.5.1.6 ec-5.5.1.6]
+
** [http://enzyme.expasy.org/EC/3.6.1.17 ec-3.6.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-20012]][c] '''=>''' 1 [[NARINGENIN-CMPD]][c]
+
* 1 [[CPD-609]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[GTP]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09285]]
+
* Gene: [[SJ07337]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20427]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6787]], flavonoid biosynthesis (in equisetum):
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7397]], naringenin biosynthesis (engineered):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7897]], flavonoid di-C-glucosylation:
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22484 22484]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02446 R02446]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01232 R01232]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P11650 P11650]
+
** [http://www.uniprot.org/uniprot/P50583 P50583]
−
** [http://www.uniprot.org/uniprot/P11651 P11651]
+
** [http://www.uniprot.org/uniprot/P49776 P49776]
−
** [http://www.uniprot.org/uniprot/P41088 P41088]
+
** [http://www.uniprot.org/uniprot/O24005 O24005]
−
** [http://www.uniprot.org/uniprot/P14298 P14298]
 
−
** [http://www.uniprot.org/uniprot/Q42925 Q42925]
 
−
** [http://www.uniprot.org/uniprot/Q42926 Q42926]
 
−
** [http://www.uniprot.org/uniprot/Q08704 Q08704]
 
−
** [http://www.uniprot.org/uniprot/P28012 P28012]
 
−
** [http://www.uniprot.org/uniprot/P41089 P41089]
 
−
** [http://www.uniprot.org/uniprot/O81980 O81980]
 
−
** [http://www.uniprot.org/uniprot/O22604 O22604]
 
−
** [http://www.uniprot.org/uniprot/O22651 O22651]
 
−
** [http://www.uniprot.org/uniprot/Q43754 Q43754]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=naringenin chalcone isomerase|chalcone isomerase}}
+
{{#set: common-name=bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)}}
−
{{#set: ec-number=ec-5.5.1.6}}
+
{{#set: ec-number=ec-3.6.1.17}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:07, 14 January 2021

Reaction 3.6.1.17-RXN

  • direction:
    • left-to-right
  • common-name:
    • bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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