Difference between revisions of "PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] == * direction: ** reversible * common-name: ** chorismate mut...")
(Created page with "Category:reaction == Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN == * direction: ** reversible * common-name: ** pyruvate phosphate dikinase * ec-number: ** [http://enzym...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] ==
+
== Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** chorismate mutase
+
** pyruvate phosphate dikinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.4.99.5 ec-5.4.99.5]
+
** [http://enzyme.expasy.org/EC/2.7.9.1 ec-2.7.9.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CHORISMATE]][c] '''<=>''' 1 [[PREPHENATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07700]]
+
* Gene: [[SJ06759]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 16: Line 16:
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00045]]
 
−
** Category: [[orthology]]
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3462]], L-phenylalanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3462 PWY-3462]
+
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type:
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
+
* [[PWY-6549]], L-glutamine biosynthesis III:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6627]], salinosporamide A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6627 PWY-6627]
+
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
−
** '''3''' reactions found over '''15''' reactions in the full pathway
+
** '''10''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-3461]], L-tyrosine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3461 PWY-3461]
+
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-6120]], L-tyrosine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6120 PWY-6120]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7626]], bacilysin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7626 PWY-7626]
 
−
** '''1''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR103107
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13900 13900]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10756 10756]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01715 R01715]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00206 R00206]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P19080 P19080]
+
** [http://www.uniprot.org/uniprot/Q7M0I6 Q7M0I6]
−
** [http://www.uniprot.org/uniprot/P27603 P27603]
+
** [http://www.uniprot.org/uniprot/O23404 O23404]
−
** [http://www.uniprot.org/uniprot/P32178 P32178]
+
** [http://www.uniprot.org/uniprot/Q9WYA9 Q9WYA9]
−
** [http://www.uniprot.org/uniprot/P43900 P43900]
+
** [http://www.uniprot.org/uniprot/P22983 P22983]
−
** [http://www.uniprot.org/uniprot/Q9RQV7 Q9RQV7]
+
** [http://www.uniprot.org/uniprot/Q41846 Q41846]
−
** [http://www.uniprot.org/uniprot/P21204 P21204]
+
** [http://www.uniprot.org/uniprot/Q42367 Q42367]
−
** [http://www.uniprot.org/uniprot/Q58029 Q58029]
+
** [http://www.uniprot.org/uniprot/Q42368 Q42368]
−
** [http://www.uniprot.org/uniprot/Q57696 Q57696]
+
** [http://www.uniprot.org/uniprot/P22221 P22221]
−
** [http://www.uniprot.org/uniprot/P43902 P43902]
+
** [http://www.uniprot.org/uniprot/P37213 P37213]
−
** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
+
** [http://www.uniprot.org/uniprot/Q42736 Q42736]
−
** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
+
** [http://www.uniprot.org/uniprot/Q42910 Q42910]
−
** [http://www.uniprot.org/uniprot/P07023 P07023]
+
** [http://www.uniprot.org/uniprot/Q39734 Q39734]
−
** [http://www.uniprot.org/uniprot/Q02286 Q02286]
+
** [http://www.uniprot.org/uniprot/Q39735 Q39735]
−
** [http://www.uniprot.org/uniprot/Q02287 Q02287]
+
** [http://www.uniprot.org/uniprot/O24612 O24612]
−
** [http://www.uniprot.org/uniprot/P42738 P42738]
+
** [http://www.uniprot.org/uniprot/O85840 O85840]
−
** [http://www.uniprot.org/uniprot/O22409 O22409]
 
−
** [http://www.uniprot.org/uniprot/O22410 O22410]
 
 
</div>
 
</div>
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=chorismate mutase}}
+
{{#set: common-name=pyruvate phosphate dikinase}}
−
{{#set: ec-number=ec-5.4.99.5}}
+
{{#set: ec-number=ec-2.7.9.1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN

  • direction:
    • reversible
  • common-name:
    • pyruvate phosphate dikinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type:
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6549, L-glutamine biosynthesis III:
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
    • 10 reactions found over 14 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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