Difference between revisions of "Pathwaytools"

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(Created page with "Category:reaction == Reaction RXN-15261 == * direction: ** left-to-right * common-name: ** dihydropterin deaminase ** 7,8-dihydropterin deaminase * ec-number: ** [http://e...")
(Created page with "Category:reaction == Reaction PHOSPHATIDATE-PHOSPHATASE-RXN == * direction: ** left-to-right * common-name: ** phosphatidate phosphatase * ec-number: ** [http://enzyme.exp...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-15261 ==
+
== Reaction PHOSPHATIDATE-PHOSPHATASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** dihydropterin deaminase
+
** phosphatidate phosphatase
−
** 7,8-dihydropterin deaminase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.4.3 ec-3.5.4.3]
+
** [http://enzyme.expasy.org/EC/3.1.3.4 ec-3.1.3.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD0-1718]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-16458]][c]
+
* 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08613]]
+
* Gene: [[SJ07984]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21676]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21389]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07066]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13957]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis:
+
* [[TRIGLSYN-PWY]], diacylglycerol and triacylglycerol biosynthesis:
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27430 27430]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02239 R02239]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=7,8-dihydropterin deaminase|dihydropterin deaminase}}
+
{{#set: common-name=phosphatidate phosphatase}}
−
{{#set: ec-number=ec-3.5.4.3}}
+
{{#set: ec-number=ec-3.1.3.4}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=5}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Revision as of 18:59, 14 January 2021

Reaction PHOSPHATIDATE-PHOSPHATASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphatidate phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRIGLSYN-PWY, diacylglycerol and triacylglycerol biosynthesis:
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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