Difference between revisions of "Pathwaytools"

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(Created page with "Category:reaction == Reaction PHOSPHATIDATE-PHOSPHATASE-RXN == * direction: ** left-to-right * common-name: ** phosphatidate phosphatase * ec-number: ** [http://enzyme.exp...")
(Created page with "{{#ask: Category:reaction reconstruction tool::pathwaytools | ?common-name | ?ec-number | ?reconstruction category | ?reconstruction source | ?reconstruction comment |...")
 
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[[Category:reaction]]
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{{#ask: [[Category:reaction]] [[reconstruction tool::pathwaytools]]
== Reaction PHOSPHATIDATE-PHOSPHATASE-RXN ==
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| ?common-name
* direction:
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| ?ec-number
** left-to-right
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| ?reconstruction category
* common-name:
+
| ?reconstruction source
** phosphatidate phosphatase
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| ?reconstruction comment
* ec-number:
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| ?nb gene associated
** [http://enzyme.expasy.org/EC/3.1.3.4 ec-3.1.3.4]
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| ?nb pathway associated
== Reaction formula ==
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}}
* 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
* Gene: [[SJ07984]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ21676]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ21389]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ07066]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ13957]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
* [[TRIGLSYN-PWY]], diacylglycerol and triacylglycerol biosynthesis:
 
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27430 27430]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02239 R02239]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=phosphatidate phosphatase}}
 
{{#set: ec-number=ec-3.1.3.4}}
 
{{#set: nb gene associated=5}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:18, 18 March 2021