Difference between revisions of "Pathwaytools"

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(Created page with "Category:reaction == Reaction HOMOACONITATE-HYDRATASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.36 ec-4.2.1.36] == Reaction form...")
(Created page with "{{#ask: Category:reaction reconstruction tool::pathwaytools | ?common-name | ?ec-number | ?reconstruction category | ?reconstruction source | ?reconstruction comment |...")
 
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[[Category:reaction]]
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{{#ask: [[Category:reaction]] [[reconstruction tool::pathwaytools]]
== Reaction HOMOACONITATE-HYDRATASE-RXN ==
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| ?common-name
* direction:
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| ?ec-number
** reversible
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| ?reconstruction category
* ec-number:
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| ?reconstruction source
** [http://enzyme.expasy.org/EC/4.2.1.36 ec-4.2.1.36]
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| ?reconstruction comment
== Reaction formula ==
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| ?nb gene associated
* 1 [[HOMO-I-CIT]][c] '''<=>''' 1 [[HOMO-CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c]
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| ?nb pathway associated
== Gene(s) associated with this reaction  ==
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}}
* Gene: [[SJ09771]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV:
 
** '''1''' reactions found over '''9''' reactions in the full pathway
 
* [[P241-PWY]], coenzyme B biosynthesis:
 
** '''1''' reactions found over '''16''' reactions in the full pathway
 
* [[PWY-3081]], L-lysine biosynthesis V:
 
** '''1''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15488 15488]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04371 R04371]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q58409 Q58409]
 
** [http://www.uniprot.org/uniprot/P49367 P49367]
 
** [http://www.uniprot.org/uniprot/Q9UT74 Q9UT74]
 
{{#set: direction=reversible}}
 
{{#set: ec-number=ec-4.2.1.36}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:18, 18 March 2021