Difference between revisions of "Pathwaytools"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17884 RXN-17884] == * direction: ** left-to-right * common-name: ** s-nitrosoglutathione reduct...") |
(Created page with "Category:reaction == Reaction HOMOACONITATE-HYDRATASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.36 ec-4.2.1.36] == Reaction form...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction HOMOACONITATE-HYDRATASE-RXN == |
* direction: | * direction: | ||
| − | ** | + | ** reversible |
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.2.1.36 ec-4.2.1.36] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[HOMO-I-CIT]][c] '''<=>''' 1 [[HOMO-CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ09771]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY | + | * [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV: |
| − | ** '''1''' reactions found over ''' | + | ** '''1''' reactions found over '''9''' reactions in the full pathway |
| + | * [[P241-PWY]], coenzyme B biosynthesis: | ||
| + | ** '''1''' reactions found over '''16''' reactions in the full pathway | ||
| + | * [[PWY-3081]], L-lysine biosynthesis V: | ||
| + | ** '''1''' reactions found over '''10''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
== External links == | == External links == | ||
| − | + | * RHEA: | |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15488 15488] |
| − | {{#set: ec-number=ec- | + | * LIGAND-RXN: |
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R04371 R04371] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/Q58409 Q58409] | ||
| + | ** [http://www.uniprot.org/uniprot/P49367 P49367] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9UT74 Q9UT74] | ||
| + | {{#set: direction=reversible}} | ||
| + | {{#set: ec-number=ec-4.2.1.36}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}} |
Revision as of 20:38, 18 December 2020
Contents
Reaction HOMOACONITATE-HYDRATASE-RXN
- direction:
- reversible
- ec-number:
Reaction formula
- 1 HOMO-I-CIT[c] <=> 1 HOMO-CIS-ACONITATE[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ09771
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- LYSINE-AMINOAD-PWY, L-lysine biosynthesis IV:
- 1 reactions found over 9 reactions in the full pathway
- P241-PWY, coenzyme B biosynthesis:
- 1 reactions found over 16 reactions in the full pathway
- PWY-3081, L-lysine biosynthesis V:
- 1 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
