Difference between revisions of "Pathwaytools"

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(Created page with "Category:reaction == Reaction HOMOACONITATE-HYDRATASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.36 ec-4.2.1.36] == Reaction form...")
(Created page with "Category:reaction == Reaction RXN-17788 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8] == Reaction formula == * 1 CPD-1026...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HOMOACONITATE-HYDRATASE-RXN ==
+
== Reaction RXN-17788 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.36 ec-4.2.1.36]
+
** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HOMO-I-CIT]][c] '''<=>''' 1 [[HOMO-CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-10269]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-19162]][c] '''+''' 1 [[ETF-Reduced]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09771]]
+
* Gene: [[SJ21233]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04334]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ15262]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV:
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P241-PWY]], coenzyme B biosynthesis:
 
−
** '''1''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-3081]], L-lysine biosynthesis V:
 
−
** '''1''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15488 15488]
+
{{#set: ec-number=ec-1.3.8}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=3}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04371 R04371]
+
{{#set: nb pathway associated=0}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q58409 Q58409]
 
−
** [http://www.uniprot.org/uniprot/P49367 P49367]
 
−
** [http://www.uniprot.org/uniprot/Q9UT74 Q9UT74]
 
−
{{#set: direction=reversible}}
 
−
{{#set: ec-number=ec-4.2.1.36}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=3}}
 
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:00, 5 January 2021

Reaction RXN-17788

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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