Difference between revisions of "Phenoxyl-rad-of-phenolic-donors"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7836 RXN-7836] == * direction: ** reversible * common-name: ** peroxisomal 3,2-trans-enoyl-coa...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCL_LPAREN_gdp_RPAREN_m SUCL_LPAREN_gdp_RPAREN_m] == * direction: ** reversible * common-name: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7836 RXN-7836] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCL_LPAREN_gdp_RPAREN_m SUCL_LPAREN_gdp_RPAREN_m] ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** peroxisomal 3,2-trans-enoyl-coa isomerase
+
** succinyl-coa ligase (gdp-forming)
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/5.3.3.8 ec-5.3.3.8]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Trans-3-enoyl-CoAs]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c]
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* 1.0 [[CO-A]][m] '''+''' 1.0 [[GTP]][m] '''+''' 1.0 [[SUC]][m] '''<=>''' 1.0 [[GDP]][m] '''+''' 1.0 [[Pi]][m] '''+''' 1.0 [[SUC-COA]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07211]]
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* Gene: [[SJ21782]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ11169]]
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* Gene: [[SJ03269]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6837]], fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6837 PWY-6837]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5138]], unsaturated, even numbered fatty acid &beta;-oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5138 PWY-5138]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=peroxisomal 3,2-trans-enoyl-coa isomerase}}
+
{{#set: common-name=succinyl-coa ligase (gdp-forming)}}
−
{{#set: ec-number=ec-5.3.3.8}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 09:28, 27 August 2019

Reaction SUCL_LPAREN_gdp_RPAREN_m

  • direction:
    • reversible
  • common-name:
    • succinyl-coa ligase (gdp-forming)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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