Difference between revisions of "Pi"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDPGALDOL-RXN KDPGALDOL-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13996 RXN-13996] == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/3.5...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDPGALDOL-RXN KDPGALDOL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13996 RXN-13996] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.2.55 ec-4.1.2.55]
+
** [http://enzyme.expasy.org/EC/3.5.4.34 ec-3.5.4.34]
−
** [http://enzyme.expasy.org/EC/4.1.2.14 ec-4.1.2.14]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETO-3-DEOXY-6-P-GLUCONATE]][c] '''=>''' 1 [[GAP]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[Adenine-37-tRNA-Alas]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[Hypoxanthine-37-In-tRNA-Alanines]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03464]]
+
* Gene: [[SJ11072]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17056]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7310]], D-glucosaminate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7310 PWY-7310]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ENTNER-DOUDOROFF-PWY]], Entner-Doudoroff shunt: [http://metacyc.org/META/NEW-IMAGE?object=ENTNER-DOUDOROFF-PWY ENTNER-DOUDOROFF-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7562]], 3,6-anhydro-&alpha;-L-galactopyranose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7562 PWY-7562]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7242]], D-fructuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7242 PWY-7242]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GALACTUROCAT-PWY]], D-galacturonate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6507]], 4-deoxy-L-threo-hex-4-enopyranuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6507 PWY-6507]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17090 17090]
+
{{#set: ec-number=ec-3.5.4.34}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05605 R05605]
+
{{#set: nb pathway associated=0}}
−
* UNIPROT:
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P44480 P44480]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P0A955 P0A955]
 
−
** [http://www.uniprot.org/uniprot/P00885 P00885]
 
−
** [http://www.uniprot.org/uniprot/Q9JR44 Q9JR44]
 
−
** [http://www.uniprot.org/uniprot/O25729 O25729]
 
−
** [http://www.uniprot.org/uniprot/Q9ZKB4 Q9ZKB4]
 
−
** [http://www.uniprot.org/uniprot/O83578 O83578]
 
−
** [http://www.uniprot.org/uniprot/Q9WXS1 Q9WXS1]
 
−
** [http://www.uniprot.org/uniprot/P50846 P50846]
 
−
** [http://www.uniprot.org/uniprot/P38448 P38448]
 
−
** [http://www.uniprot.org/uniprot/Q55872 Q55872]
 
−
** [http://www.uniprot.org/uniprot/P94802 P94802]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: ec-number=ec-4.1.2.14|ec-4.1.2.55}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=7}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction RXN-13996

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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