Difference between revisions of "Propionyl-CoA-CO2-ligases"
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(Created page with "Category:gene == Gene SJ18425 == * transcription-direction: ** positive * right-end-position: ** 108754 * left-end-position: ** 97682 * centisome-position: ** 39.59113...") |
(Created page with "Category:gene == Gene SJ20245 == * transcription-direction: ** negative * right-end-position: ** 162188 * left-end-position: ** 138517 * centisome-position: ** 65.80537...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ20245 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 162188 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 138517 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 65.80537 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[DLACTDEHYDROGNAD-RXN]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[P122-PWY]] |
− | ** ''' | + | ** '''16''' reactions found over '''18''' reactions in the full pathway |
− | * [[ | + | * [[FERMENTATION-PWY]] |
− | ** ''' | + | ** '''11''' reactions found over '''16''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY4LZ-257]] |
− | ** ''' | + | ** '''7''' reactions found over '''7''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-6454]] |
− | ** '''8''' reactions found over ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
− | {{#set: transcription-direction= | + | * [[PWY-6901]] |
− | {{#set: right-end-position= | + | ** '''10''' reactions found over '''8''' reactions in the full pathway |
− | {{#set: left-end-position= | + | * [[ALACAT2-PWY]] |
− | {{#set: centisome-position= | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=162188}} | ||
+ | {{#set: left-end-position=138517}} | ||
+ | {{#set: centisome-position=65.80537 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Revision as of 09:28, 27 August 2019
Contents
Gene SJ20245
- transcription-direction:
- negative
- right-end-position:
- 162188
- left-end-position:
- 138517
- centisome-position:
- 65.80537
Organism(s) associated with this gene
Reaction(s) associated
- DLACTDEHYDROGNAD-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- P122-PWY
- 16 reactions found over 18 reactions in the full pathway
- FERMENTATION-PWY
- 11 reactions found over 16 reactions in the full pathway
- PWY4LZ-257
- 7 reactions found over 7 reactions in the full pathway
- PWY-6454
- 1 reactions found over 3 reactions in the full pathway
- PWY-6901
- 10 reactions found over 8 reactions in the full pathway
- ALACAT2-PWY
- 3 reactions found over 3 reactions in the full pathway