Difference between revisions of "Protein-N-omega-dimethyl-arginine"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINOCYL-TRNA-HYDROLASE-RXN AMINOCYL-TRNA-HYDROLASE-RXN] == * direction: ** left-to-right * common-...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-KIN-RXN GLYCEROL-KIN-RXN] == * direction: ** reversible * common-name: ** glycerol kinase...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINOCYL-TRNA-HYDROLASE-RXN AMINOCYL-TRNA-HYDROLASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-KIN-RXN GLYCEROL-KIN-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** peptidyl-trna hydrolase
+
** glycerol kinase
−
** aminoacyl-trna hydrolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.1.29 ec-3.1.1.29]
+
** [http://enzyme.expasy.org/EC/2.7.1.30 ec-2.7.1.30]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[N-Substituted-Aminoacyl-tRNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-Substituted-Amino-Acids]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNAs]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[GLYCEROL]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ11594]]
−
* Gene: [[SJ05960]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ02121]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03879]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ09079]]
+
* Gene: [[SJ11595]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ00680]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-4261]], glycerol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4261 PWY-4261]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21647 21647]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00847 R00847]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9JV42 Q9JV42]
+
** [http://www.uniprot.org/uniprot/P18157 P18157]
−
** [http://www.uniprot.org/uniprot/P44682 P44682]
+
** [http://www.uniprot.org/uniprot/P47284 P47284]
−
** [http://www.uniprot.org/uniprot/Q9PII7 Q9PII7]
+
** [http://www.uniprot.org/uniprot/Q9CG64 Q9CG64]
−
** [http://www.uniprot.org/uniprot/Q9CJI1 Q9CJI1]
+
** [http://www.uniprot.org/uniprot/Q9V207 Q9V207]
−
** [http://www.uniprot.org/uniprot/P0A7D1 P0A7D1]
+
** [http://www.uniprot.org/uniprot/P44400 P44400]
−
** [http://www.uniprot.org/uniprot/Q59989 Q59989]
+
** [http://www.uniprot.org/uniprot/Q9WX53 Q9WX53]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/Q7M0X5 Q7M0X5]
−
{{#set: common-name=aminoacyl-trna hydrolase|peptidyl-trna hydrolase}}
+
** [http://www.uniprot.org/uniprot/P0A6F3 P0A6F3]
−
{{#set: ec-number=ec-3.1.1.29}}
+
** [http://www.uniprot.org/uniprot/P25013 P25013]
−
{{#set: nb gene associated=5}}
+
** [http://www.uniprot.org/uniprot/P19255 P19255]
−
{{#set: nb pathway associated=0}}
+
** [http://www.uniprot.org/uniprot/P32190 P32190]
−
{{#set: reconstruction category=orthology|annotation}}
+
** [http://www.uniprot.org/uniprot/P32189 P32189]
 +
** [http://www.uniprot.org/uniprot/P95907 P95907]
 +
** [http://www.uniprot.org/uniprot/Q49011 Q49011]
 +
** [http://www.uniprot.org/uniprot/O93623 O93623]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=glycerol kinase}}
 +
{{#set: ec-number=ec-2.7.1.30}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 09:29, 27 August 2019

Reaction GLYCEROL-KIN-RXN

  • direction:
    • reversible
  • common-name:
    • glycerol kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4261, glycerol degradation I: PWY-4261
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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