Difference between revisions of "Protein-ribulosamines"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CYTIDYLYLTRANSFERASE-RXN TRNA-CYTIDYLYLTRANSFERASE-RXN] == * direction: ** left-to-right * com...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13709-4-METHYL-824-CHOLESTADIENOL/NADPH/OXYGEN-MOLECULE/PROTON//CPD-4702/NADP/WATER.78. RXN-137...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CYTIDYLYLTRANSFERASE-RXN TRNA-CYTIDYLYLTRANSFERASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13709-4-METHYL-824-CHOLESTADIENOL/NADPH/OXYGEN-MOLECULE/PROTON//CPD-4702/NADP/WATER.78. RXN-13709-4-METHYL-824-CHOLESTADIENOL/NADPH/OXYGEN-MOLECULE/PROTON//CPD-4702/NADP/WATER.78.] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** trna adenylyl-/cytidylyl-transferase
 
** ctp:trna cytidylyltransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.7.7.72 ec-2.7.7.72]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 2 [[CTP]][c] '''+''' 1 [[tRNA-precursors]][c] '''=>''' 3 [[PPI]][c] '''+''' 1 [[tRNAs-with-CCA]][c]
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* 1.0 [[4-METHYL-824-CHOLESTADIENOL]][c] '''+''' 3.0 [[NADPH]][c] '''+''' 3.0 [[OXYGEN-MOLECULE]][c] '''+''' 2.0 [[PROTON]][c] '''=>''' 1.0 [[CPD-4702]][c] '''+''' 3.0 [[NADP]][c] '''+''' 4.0 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ20164]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ20166]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14434 14434]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R09382 R09382]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=ctp:trna cytidylyltransferase|trna adenylyl-/cytidylyl-transferase}}
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{{#set: nb gene associated=0}}
{{#set: ec-number=ec-2.7.7.72}}
 
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=meneco}}
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 09:29, 27 August 2019