Difference between revisions of "Pyrophosphate-inositol-phosphates"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=APIGNAR-RXN APIGNAR-RXN] == * direction: ** left-to-right * common-name: ** naringenin chalcone iso...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4225 RXN-4225] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=APIGNAR-RXN APIGNAR-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4225 RXN-4225] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** naringenin chalcone isomerase
 
−
** chalcone isomerase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.5.1.6 ec-5.5.1.6]
+
** [http://enzyme.expasy.org/EC/1.14.13 ec-1.14.13]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-20012]][c] '''=>''' 1 [[NARINGENIN-CMPD]][c]
+
* 1 [[CPD-707]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-3943]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09285]]
+
* Gene: [[SJ05072]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20427]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
+
* [[PWY-2582]], brassinosteroid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2582 PWY-2582]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7397]], naringenin biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7397 PWY-7397]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7897]], flavonoid di-C-glucosylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7897 PWY-7897]
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02446 R02446]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07445 R07445]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P11650 P11650]
 
−
** [http://www.uniprot.org/uniprot/P11651 P11651]
 
−
** [http://www.uniprot.org/uniprot/P41088 P41088]
 
−
** [http://www.uniprot.org/uniprot/P14298 P14298]
 
−
** [http://www.uniprot.org/uniprot/Q42925 Q42925]
 
−
** [http://www.uniprot.org/uniprot/Q42926 Q42926]
 
−
** [http://www.uniprot.org/uniprot/Q08704 Q08704]
 
−
** [http://www.uniprot.org/uniprot/P28012 P28012]
 
−
** [http://www.uniprot.org/uniprot/P41089 P41089]
 
−
** [http://www.uniprot.org/uniprot/O81980 O81980]
 
−
** [http://www.uniprot.org/uniprot/O22604 O22604]
 
−
** [http://www.uniprot.org/uniprot/O22651 O22651]
 
−
** [http://www.uniprot.org/uniprot/Q43754 Q43754]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=naringenin chalcone isomerase|chalcone isomerase}}
+
{{#set: ec-number=ec-1.14.13}}
−
{{#set: ec-number=ec-5.5.1.6}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:24, 26 August 2019

Reaction RXN-4225

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2582, brassinosteroid biosynthesis II: PWY-2582
    • 4 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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