Difference between revisions of "Pyrophosphate-inositol-phosphates"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4225 RXN-4225] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:gene == Gene SJ06382 == * transcription-direction: ** positive * right-end-position: ** 154897 * left-end-position: ** 120228 * centisome-position: ** 25.259045...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4225 RXN-4225] ==
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== Gene SJ06382 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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* ec-number:
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* right-end-position:
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** [http://enzyme.expasy.org/EC/1.14.13 ec-1.14.13]
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** 154897
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== Reaction formula ==
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* left-end-position:
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* 1 [[CPD-707]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-3943]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
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** 120228
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[SJ05072]]
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** 25.259045   
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** Category: [[orthology]]
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== Organism(s) associated with this gene  ==
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[S.japonica_carotenoid_curated]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) associated ==
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== Pathway(s)  ==
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* [[3.6.4.4-RXN]]
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* [[PWY-2582]], brassinosteroid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2582 PWY-2582]
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** Category: [[annotation]]
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** '''4''' reactions found over '''21''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reconstruction information  ==
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* [[ATPASE-RXN]]
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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** Category: [[annotation]]
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* LIGAND-RXN:
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** Category: [[annotation]]
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** [http://www.genome.jp/dbget-bin/www_bget?R07445 R07445]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: direction=left-to-right}}
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* [[RXN-12195]]
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{{#set: ec-number=ec-1.14.13}}
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** Category: [[annotation]]
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{{#set: nb gene associated=1}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb pathway associated=1}}
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* [[RXN-12196]]
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{{#set: reconstruction category=orthology}}
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** Category: [[annotation]]
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{{#set: reconstruction tool=pantograph}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: reconstruction comment=n.a}}
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* [[RXN0-5462]]
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{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=154897}}
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{{#set: left-end-position=120228}}
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{{#set: centisome-position=25.259045    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Revision as of 09:28, 27 August 2019

Gene SJ06382

  • transcription-direction:
    • positive
  • right-end-position:
    • 154897
  • left-end-position:
    • 120228
  • centisome-position:
    • 25.259045

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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