Difference between revisions of "QUINOLINATE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] == * direction: ** left-to-right * common-name: ** diacylglycero...")
(Created page with "Category:gene == Gene SJ20291 == * transcription-direction: ** positive * right-end-position: ** 124848 * left-end-position: ** 123940 * centisome-position: ** 59.21842...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] ==
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== Gene SJ20291 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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* common-name:
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* right-end-position:
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** diacylglycerol kinase
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** 124848
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* ec-number:
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* left-end-position:
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** [http://enzyme.expasy.org/EC/2.7.1.107 ec-2.7.1.107]
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** 123940
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== Reaction formula ==
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* centisome-position:
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* 1 [[ATP]][c] '''+''' 1 [[DIACYLGLYCEROL]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c]
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** 59.21842   
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
 +
* [[S.japonica_carotenoid_curated]]
 +
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ03368]]
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* [[3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ESTRADIOL-17-BETA-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[HBNOm]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* Gene: [[SJ04262]]
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* [[RETINOL-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[SJ12057]]
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* [[RXN-12581]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[SJ12148]]
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* [[RXN-17728]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* Gene: [[SJ04791]]
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* [[TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ16261]]
 
−
** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
</div>
 
</div>
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== Pathway(s) ==
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== Pathway(s) associated ==
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* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
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* [[PWY66-368]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-367]]
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
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* [[PWY66-380]]
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** '''6''' reactions found over '''16''' reactions in the full pathway
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[PWY-6872]]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PWY-7782]]
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== External links  ==
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** '''11''' reactions found over '''16''' reactions in the full pathway
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: transcription-direction=positive}}
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* RHEA:
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{{#set: right-end-position=124848}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10272 10272]
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{{#set: left-end-position=123940}}
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* LIGAND-RXN:
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{{#set: centisome-position=59.21842    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02240 R02240]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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* UNIPROT:
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{{#set: nb reaction associated=7}}
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** [http://www.uniprot.org/uniprot/Q01583 Q01583]
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{{#set: nb pathway associated=5}}
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** [http://www.uniprot.org/uniprot/P49621 P49621]
 
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** [http://www.uniprot.org/uniprot/P49619 P49619]
 
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** [http://www.uniprot.org/uniprot/P51556 P51556]
 
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** [http://www.uniprot.org/uniprot/Q9JTJ7 Q9JTJ7]
 
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** [http://www.uniprot.org/uniprot/Q9CGK9 Q9CGK9]
 
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** [http://www.uniprot.org/uniprot/Q9PIN8 Q9PIN8]
 
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** [http://www.uniprot.org/uniprot/O08560 O08560]
 
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** [http://www.uniprot.org/uniprot/P0ABN1 P0ABN1]
 
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** [http://www.uniprot.org/uniprot/P20192 P20192]
 
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** [http://www.uniprot.org/uniprot/P23743 P23743]
 
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** [http://www.uniprot.org/uniprot/Q06119 Q06119]
 
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** [http://www.uniprot.org/uniprot/Q03603 Q03603]
 
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** [http://www.uniprot.org/uniprot/Q39017 Q39017]
 
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** [http://www.uniprot.org/uniprot/Q09103 Q09103]
 
−
</div>
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=diacylglycerol kinase}}
 
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{{#set: ec-number=ec-2.7.1.107}}
 
−
{{#set: nb gene associated=6}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 09:28, 27 August 2019

Gene SJ20291

  • transcription-direction:
    • positive
  • right-end-position:
    • 124848
  • left-end-position:
    • 123940
  • centisome-position:
    • 59.21842

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-368
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-367
    • 4 reactions found over 5 reactions in the full pathway
  • PWY66-380
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6872
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=QUINOLINATE&oldid=34352"