Difference between revisions of "R-2-METHYLMALATE-DEHYDRATASE-RXN"

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(Created page with "Category:reaction == Reaction XNDH == * direction: ** left-to-right * common-name: ** xanthine dehydrogenase == Reaction formula == * 1.0 NAD[c] '''+''' 1.0 WATER[...")
(Created page with "Category:reaction == Reaction R-2-METHYLMALATE-DEHYDRATASE-RXN == * direction: ** reversible * common-name: ** (r)-2-methylmalate hydro-lyase (2-methylmaleate-forming) * e...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction XNDH ==
+
== Reaction R-2-METHYLMALATE-DEHYDRATASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** xanthine dehydrogenase
+
** (r)-2-methylmalate hydro-lyase (2-methylmaleate-forming)
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.35 ec-4.2.1.35]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[NAD]][c] '''+''' 1.0 [[WATER]][c] '''+''' 1.0 [[XANTHINE]][c] '''=>''' 1.0 [[NADH]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[URATE]][c]
+
* 1 [[CPD-31]][c] '''<=>''' 1 [[2-METHYLMALEATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13098]]
+
* Gene: [[SJ09771]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ05674]]
+
* Gene: [[SJ22396]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5101]], L-isoleucine biosynthesis II:
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7698]], 2,5-xylenol and 3,5-xylenol degradation:
 +
** '''1''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* METANETX-RXN : MNXR108509
−
{{#set: common-name=xanthine dehydrogenase}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22332 22332]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03896 R03896]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=(r)-2-methylmalate hydro-lyase (2-methylmaleate-forming)}}
 +
{{#set: ec-number=ec-4.2.1.35}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction R-2-METHYLMALATE-DEHYDRATASE-RXN

  • direction:
    • reversible
  • common-name:
    • (r)-2-methylmalate hydro-lyase (2-methylmaleate-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5101, L-isoleucine biosynthesis II:
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7698, 2,5-xylenol and 3,5-xylenol degradation:
    • 1 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR108509
  • RHEA:
  • LIGAND-RXN:





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