Difference between revisions of "R05819"

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(Created page with "Category:reaction == Reaction PRAISOM-RXN == * direction: ** left-to-right * common-name: ** phosphoribosylanthranilate isomerase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction R05819 == * direction: ** reversible * common-name: ** phycoerythrobilin:ferredoxin oxidoreductase == Reaction formula == * 1.0 1516-DIHYDR...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PRAISOM-RXN ==
+
== Reaction R05819 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** phosphoribosylanthranilate isomerase
+
** phycoerythrobilin:ferredoxin oxidoreductase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/5.3.1.24 ec-5.3.1.24]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''=>''' 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c]
+
* 1.0 [[1516-DIHYDROBILIVERDIN]][h] '''+''' 1.0 [[Reduced-ferredoxins]][h] '''<=>''' 1.0 [[3Z-PHYCOERYTHROBILIN]][h] '''+''' 1.0 [[Oxidized-ferredoxins]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17722]]
+
* Gene: [[SJ04581]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ01083]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRPSYN-PWY]], L-tryptophan biosynthesis:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: direction=reversible}}
−
* RHEA:
+
{{#set: common-name=phycoerythrobilin:ferredoxin oxidoreductase}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21541 21541]
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{{#set: nb gene associated=1}}
−
* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03509 R03509]
+
{{#set: reconstruction category=orthology}}
−
* UNIPROT:
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P16923 P16923]
 
−
** [http://www.uniprot.org/uniprot/O67853 O67853]
 
−
** [http://www.uniprot.org/uniprot/P12289 P12289]
 
−
** [http://www.uniprot.org/uniprot/P42393 P42393]
 
−
** [http://www.uniprot.org/uniprot/Q9PIF3 Q9PIF3]
 
−
** [http://www.uniprot.org/uniprot/Q57893 Q57893]
 
−
** [http://www.uniprot.org/uniprot/P20167 P20167]
 
−
** [http://www.uniprot.org/uniprot/Q9JVD1 Q9JVD1]
 
−
** [http://www.uniprot.org/uniprot/P00910 P00910]
 
−
** [http://www.uniprot.org/uniprot/P00909 P00909]
 
−
** [http://www.uniprot.org/uniprot/P00912 P00912]
 
−
** [http://www.uniprot.org/uniprot/P13997 P13997]
 
−
** [http://www.uniprot.org/uniprot/P50857 P50857]
 
−
** [http://www.uniprot.org/uniprot/P27710 P27710]
 
−
** [http://www.uniprot.org/uniprot/P17218 P17218]
 
−
** [http://www.uniprot.org/uniprot/P00908 P00908]
 
−
** [http://www.uniprot.org/uniprot/P18483 P18483]
 
−
** [http://www.uniprot.org/uniprot/Q02002 Q02002]
 
−
** [http://www.uniprot.org/uniprot/Q56320 Q56320]
 
−
** [http://www.uniprot.org/uniprot/Q01128 Q01128]
 
−
** [http://www.uniprot.org/uniprot/P74435 P74435]
 
−
** [http://www.uniprot.org/uniprot/Q9YGB1 Q9YGB1]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=phosphoribosylanthranilate isomerase}}
 
−
{{#set: ec-number=ec-5.3.1.24}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:19, 18 March 2021

Reaction R05819

  • direction:
    • reversible
  • common-name:
    • phycoerythrobilin:ferredoxin oxidoreductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=R05819&oldid=140314"