Difference between revisions of "R05819"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12669 RXN-12669] == * direction: ** left-to-right * common-name: ** acyl-coa oxidase * ec-numbe...")
(Created page with "Category:reaction == Reaction R05819 == * direction: ** reversible * common-name: ** phycoerythrobilin:ferredoxin oxidoreductase == Reaction formula == * 1.0 1516-DIHYDR...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12669 RXN-12669] ==
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== Reaction R05819 ==
 
* direction:
 
* direction:
** left-to-right
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** reversible
 
* common-name:
 
* common-name:
** acyl-coa oxidase
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** phycoerythrobilin:ferredoxin oxidoreductase
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-196]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD0-2108]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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* 1.0 [[1516-DIHYDROBILIVERDIN]][h] '''+''' 1.0 [[Reduced-ferredoxins]][h] '''<=>''' 1.0 [[3Z-PHYCOERYTHROBILIN]][h] '''+''' 1.0 [[Oxidized-ferredoxins]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ13468]]
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* Gene: [[SJ04581]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ03090]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ07451]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ19669]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ07452]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: direction=left-to-right}}
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{{#set: direction=reversible}}
{{#set: common-name=acyl-coa oxidase}}
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{{#set: common-name=phycoerythrobilin:ferredoxin oxidoreductase}}
{{#set: ec-number=ec-1.3.3.6}}
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{{#set: nb gene associated=1}}
{{#set: nb gene associated=5}}
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{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:19, 18 March 2021

Reaction R05819

  • direction:
    • reversible
  • common-name:
    • phycoerythrobilin:ferredoxin oxidoreductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links