Difference between revisions of "R145-RXN"

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(Created page with "Category:reaction == Reaction RXN-10061 == * direction: ** left-to-right * common-name: ** 3-hydroxycerotyl-[acp] dehydrase ** (r)-3-hydroxycerotyl-[acp] dehydratase * ec-...")
(Created page with "Category:reaction == Reaction R145-RXN == * direction: ** left-to-right * common-name: ** methylthioribulose 1-phosphate dehydratase * ec-number: ** [http://enzyme.expasy....")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-10061 ==
+
== Reaction R145-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 3-hydroxycerotyl-[acp] dehydrase
+
** methylthioribulose 1-phosphate dehydratase
** (r)-3-hydroxycerotyl-[acp] dehydratase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
+
** [http://enzyme.expasy.org/EC/4.2.1.109 ec-4.2.1.109]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[R-3-hydroxycerotoyl-ACPs]][c] '''=>''' 1 [[Trans-D2-hexacos-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-1063]][c] '''=>''' 1 [[CPD-8999]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ10275]]
+
* Gene: [[SJ17981]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6113]], superpathway of mycolate biosynthesis:
+
* [[PWY-4361]], S-methyl-5-thio-α-D-ribose 1-phosphate degradation I:
** '''8''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
* [[PWYG-321]], mycolate biosynthesis:
 
** '''26''' reactions found over '''182''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR125830
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15550 15550]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07392 R07392]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-hydroxycerotyl-[acp] dehydrase|(r)-3-hydroxycerotyl-[acp] dehydratase}}
+
{{#set: common-name=methylthioribulose 1-phosphate dehydratase}}
{{#set: ec-number=ec-4.2.1.59}}
+
{{#set: ec-number=ec-4.2.1.109}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction R145-RXN

  • direction:
    • left-to-right
  • common-name:
    • methylthioribulose 1-phosphate dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4361, S-methyl-5-thio-α-D-ribose 1-phosphate degradation I:
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR125830
  • RHEA:
  • LIGAND-RXN: