Difference between revisions of "RETINAL"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13417 RXN-13417] == * direction: ** left-to-right == Reaction formula == * 1 N-4-aminobutylid...")
(Created page with "Category:metabolite == Metabolite RETINAL == * common-name: ** all-trans-retinal * smiles: ** cc(c=cc1(c(c)(c)cccc(c)=1))=cc=cc(c)=c[ch]=o * inchi-key: ** ncycyzxnizjoki-o...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13417 RXN-13417] ==
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== Metabolite RETINAL ==
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* direction:
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* common-name:
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** left-to-right
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** all-trans-retinal
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== Reaction formula ==
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* smiles:
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* 1 [[N-4-aminobutylidene-eIF5A-lysine]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-9973]][c] '''+''' 1 [[NAD]][c]
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** cc(c=cc1(c(c)(c)cccc(c)=1))=cc=cc(c)=c[ch]=o
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== Gene(s) associated with this reaction  ==
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* inchi-key:
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* Gene: [[SJ09995]]
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** ncycyzxnizjoki-ovsjkpmpsa-n
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** Category: [[annotation]]
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* molecular-weight:
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** 284.441
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** Category: [[orthology]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RETINOL-DEHYDROGENASE-RXN]]
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== Pathway(s) ==
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* [[RXN-10841]]
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* [[PWY-5905]], hypusine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5905 PWY-5905]
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== Reaction(s) known to produce the compound ==
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[RETINOL-DEHYDROGENASE-RXN]]
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== Reconstruction information  ==
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* [[RXN-10841]]
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-11783]]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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== External links  ==
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{{#set: common-name=all-trans-retinal}}
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{{#set: direction=left-to-right}}
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{{#set: inchi-key=inchikey=ncycyzxnizjoki-ovsjkpmpsa-n}}
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{{#set: nb gene associated=1}}
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{{#set: molecular-weight=284.441}}
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:16, 18 March 2021

Metabolite RETINAL

  • common-name:
    • all-trans-retinal
  • smiles:
    • cc(c=cc1(c(c)(c)cccc(c)=1))=cc=cc(c)=c[ch]=o
  • inchi-key:
    • ncycyzxnizjoki-ovsjkpmpsa-n
  • molecular-weight:
    • 284.441

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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