Difference between revisions of "RETINOL-DEHYDROGENASE-RXN"

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(Created page with "Category:reaction == Reaction CYSPH-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1] == Reaction formula == * 1 CYS[c]...")
(Created page with "Category:reaction == Reaction RXN-5467 == * direction: ** left-to-right * common-name: ** (mannosyl)6-(n-acetylglucosaminyl)2-diphosphodolichol:dolichyl β-d-mannosyl...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CYSPH-RXN ==
+
== Reaction RXN-5467 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** (mannosyl)6-(n-acetylglucosaminyl)2-diphosphodolichol:dolichyl β-d-mannosyl phosphate mannosyl transferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1]
+
** [http://enzyme.expasy.org/EC/2.4.1.259 ec-2.4.1.259]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CYS]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD-171]][c] '''+''' 1 [[CPD-5165]][c] '''=>''' 1 [[CPD-5166]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ19084]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11915]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-702]], L-methionine biosynthesis II (plants):
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic):
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06259 R06259]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29534 29534]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.5.1}}
+
{{#set: common-name=(mannosyl)6-(n-acetylglucosaminyl)2-diphosphodolichol:dolichyl β-d-mannosyl phosphate mannosyl transferase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-2.4.1.259}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:16, 14 January 2021

Reaction RXN-5467

  • direction:
    • left-to-right
  • common-name:
    • (mannosyl)6-(n-acetylglucosaminyl)2-diphosphodolichol:dolichyl β-d-mannosyl phosphate mannosyl transferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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