Difference between revisions of "RH-Group"

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(Created page with "Category:gene == Gene SJ08366 == * transcription-direction: ** negative * right-end-position: ** 53537 * left-end-position: ** 30863 * centisome-position: ** 56.80969...")
(Created page with "Category:gene == Gene SJ03192 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * L-LACTATE-DEHYDROGENASE-...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ08366 ==
+
== Gene SJ03192 ==
* transcription-direction:
 
** negative
 
* right-end-position:
 
** 53537
 
* left-end-position:
 
** 30863
 
* centisome-position:
 
** 56.80969   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[L-LACTATE-DEHYDROGENASE-RXN]]
* [[3.1.1.64-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[CARBOXYLESTERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[PROLINE--TRNA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10711]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10767]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12252]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12575]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXNQT-4366]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[TRNA-CHARGING-PWY]]
+
* [[P122-PWY]]
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''16''' reactions found over '''18''' reactions in the full pathway
* [[PWY-6303]]
+
* [[P124-PWY]]
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''12''' reactions found over '''15''' reactions in the full pathway
* [[PWY-6857]]
+
* [[PWY-5481]]
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
{{#set: transcription-direction=negative}}
+
* [[PWY-6901]]
{{#set: right-end-position=53537}}
+
** '''10''' reactions found over '''8''' reactions in the full pathway
{{#set: left-end-position=30863}}
 
{{#set: centisome-position=56.80969    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Revision as of 09:28, 27 August 2019

Gene SJ03192

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • PWY-5481
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway