|
|
| (9 intermediate revisions by 5 users not shown) |
| Line 1: |
Line 1: |
| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE--TRNA-LIGASE-RXN GLUTAMINE--TRNA-LIGASE-RXN] == | + | == Metabolite RIBITOL == |
| − | * direction:
| |
| − | ** left-to-right
| |
| | * common-name: | | * common-name: |
| − | ** glutamine-trna ligase | + | ** d-ribitol |
| − | * ec-number: | + | * smiles: |
| − | ** [http://enzyme.expasy.org/EC/6.1.1.18 ec-6.1.1.18] | + | ** c(o)c(o)c(o)c(o)co |
| − | == Reaction formula ==
| + | * inchi-key: |
| − | * 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[GLN-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLN-tRNAs]][c] '''+''' 1 [[PPI]][c]
| + | ** hebkchpvoiaqta-zxfhetkhsa-n |
| − | == Gene(s) associated with this reaction ==
| + | * molecular-weight: |
| − | * Gene: [[SJ16362]] | + | ** 152.147 |
| − | ** Category: [[annotation]]
| + | == Reaction(s) known to consume the compound == |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | + | * [[RIBITOL-2-DEHYDROGENASE-RXN]] |
| − | * Gene: [[SJ22527]]
| + | == Reaction(s) known to produce the compound == |
| − | ** Category: [[orthology]]
| + | * [[RIBITOL-2-DEHYDROGENASE-RXN]] |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | == Reaction(s) of unknown directionality == |
| − | * Gene: [[SJ21190]]
| + | {{#set: common-name=d-ribitol}} |
| − | ** Category: [[annotation]] | + | {{#set: inchi-key=inchikey=hebkchpvoiaqta-zxfhetkhsa-n}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | {{#set: molecular-weight=152.147}} |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | |
| − | == Pathway(s) == | |
| − | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | |
| − | ** '''21''' reactions found over '''21''' reactions in the full pathway
| |
| − | == Reconstruction information == | |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | == External links == | |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20122 20122]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03652 R03652]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/O59314 O59314]
| |
| − | ** [http://www.uniprot.org/uniprot/P43831 P43831]
| |
| − | ** [http://www.uniprot.org/uniprot/P47897 P47897]
| |
| − | ** [http://www.uniprot.org/uniprot/P14325 P14325]
| |
| − | ** [http://www.uniprot.org/uniprot/P95968 P95968]
| |
| − | ** [http://www.uniprot.org/uniprot/P13188 P13188]
| |
| − | ** [http://www.uniprot.org/uniprot/P00962 P00962]
| |
| − | ** [http://www.uniprot.org/uniprot/P52780 P52780]
| |
| − | {{#set: direction=left-to-right}}
| |
| − | {{#set: common-name=glutamine-trna ligase}} | |
| − | {{#set: ec-number=ec-6.1.1.18}} | |
| − | {{#set: nb gene associated=3}} | |
| − | {{#set: nb pathway associated=1}}
| |
| − | {{#set: reconstruction category=orthology|annotation}}
| |
| − | {{#set: reconstruction tool=pathwaytools|pantograph}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
| |
