Difference between revisions of "RIBITOL-2-DEHYDROGENASE-RXN"

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(Created page with "Category:reaction == Reaction SULFITE-REDUCT-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.8.1.2 ec-1.8.1.2] == Reaction formula == *...")
(Created page with "Category:reaction == Reaction RIBITOL-2-DEHYDROGENASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.56 ec-1.1.1.56] == Reaction form...")
 
(5 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SULFITE-REDUCT-RXN ==
+
== Reaction RIBITOL-2-DEHYDROGENASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.8.1.2 ec-1.8.1.2]
+
** [http://enzyme.expasy.org/EC/1.1.1.56 ec-1.1.1.56]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3 [[NADPH]][c] '''+''' 5 [[PROTON]][c] '''+''' 1 [[SO3]][c] '''=>''' 1 [[HS]][c] '''+''' 3 [[NADP]][c] '''+''' 3 [[WATER]][c]
+
* 1 [[NAD]][c] '''+''' 1 [[RIBITOL]][c] '''<=>''' 1 [[D-RIBULOSE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ14725]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12355]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03883]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12574]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14724]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14723]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21226]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04229]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[SO4ASSIM-PWY]], assimilatory sulfate reduction I:
+
* [[RIBITOLUTIL-PWY]], ribitol degradation:
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6683]], assimilatory sulfate reduction III:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR103437
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13803 13803]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20053 20053]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00858 R00858]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01895 R01895]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P38039 P38039]
+
** [http://www.uniprot.org/uniprot/P00335 P00335]
−
** [http://www.uniprot.org/uniprot/P17845 P17845]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q9JUD9 Q9JUD9]
+
{{#set: ec-number=ec-1.1.1.56}}
−
** [http://www.uniprot.org/uniprot/Q9JUD8 Q9JUD8]
+
{{#set: nb gene associated=8}}
−
** [http://www.uniprot.org/uniprot/O32214 O32214]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P38038 P38038]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/Q59396 Q59396]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P17846 P17846]
+
{{#set: reconstruction comment=n.a}}
−
** [http://www.uniprot.org/uniprot/P52674 P52674]
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
−
** [http://www.uniprot.org/uniprot/P39692 P39692]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: ec-number=ec-1.8.1.2}}
 
−
{{#set: nb gene associated=0}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=gap-filling}}
 
−
{{#set: reconstruction tool=meneco}}
 
−
{{#set: reconstruction comment=added for gapfilling}}
 
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
 

Latest revision as of 11:20, 18 March 2021

Reaction RIBITOL-2-DEHYDROGENASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • RIBITOLUTIL-PWY, ribitol degradation:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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