Difference between revisions of "RIBOFLAVIN-SYN-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1261 PWY0-1261] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]...")
 
(Created page with "Category:reaction == Reaction RIBOFLAVIN-SYN-RXN == * direction: ** left-to-right * common-name: ** riboflavin synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1....")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1261 PWY0-1261] ==
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== Reaction RIBOFLAVIN-SYN-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
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** anhydromuropeptides recycling i
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** riboflavin synthase
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== Reaction(s) found ==
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* ec-number:
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* [[2.3.1.157-RXN]]
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** [http://enzyme.expasy.org/EC/2.5.1.9 ec-2.5.1.9]
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* [[NAG1P-URIDYLTRANS-RXN]]
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== Reaction formula ==
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* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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* 2 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''+''' 1 [[RIBOFLAVIN]][c]
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== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=5.4.2.10-RXN 5.4.2.10-RXN]
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* Gene: [[SJ11166]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5227 RXN0-5227]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4621 RXN0-4621]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4641 RXN0-4641]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=NAG6PDEACET-RXN NAG6PDEACET-RXN]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5225 RXN0-5225]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN]
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== Pathway(s)  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2361 RXN0-2361]
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5226 RXN0-5226]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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{{#set: taxonomic-range=tax-2}}
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* [[PWY-6167]], flavin biosynthesis II (archaea):
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{{#set: common-name=anhydromuropeptides recycling i}}
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** '''5''' reactions found over '''10''' reactions in the full pathway
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{{#set: nb reaction found=3}}
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* [[PWY-6168]], flavin biosynthesis III (fungi):
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{{#set: completion rate=0.25}}
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** '''7''' reactions found over '''9''' reactions in the full pathway
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{{#set: nb total reaction=12}}
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR103430
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20773 20773]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00066 R00066]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P11998 P11998]
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** [http://www.uniprot.org/uniprot/P16440 P16440]
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** [http://www.uniprot.org/uniprot/Q9JUA6 Q9JUA6]
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** [http://www.uniprot.org/uniprot/O24854 O24854]
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** [http://www.uniprot.org/uniprot/O26237 O26237]
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** [http://www.uniprot.org/uniprot/P66037 P66037]
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** [http://www.uniprot.org/uniprot/Q9CGU8 Q9CGU8]
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** [http://www.uniprot.org/uniprot/Q9YDC5 Q9YDC5]
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** [http://www.uniprot.org/uniprot/Q9PN77 Q9PN77]
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** [http://www.uniprot.org/uniprot/Q9CGU6 Q9CGU6]
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** [http://www.uniprot.org/uniprot/P45273 P45273]
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** [http://www.uniprot.org/uniprot/Q9PIB9 Q9PIB9]
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** [http://www.uniprot.org/uniprot/O66529 O66529]
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** [http://www.uniprot.org/uniprot/Q58584 Q58584]
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** [http://www.uniprot.org/uniprot/O28856 O28856]
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** [http://www.uniprot.org/uniprot/Q01994 Q01994]
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** [http://www.uniprot.org/uniprot/P61714 P61714]
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** [http://www.uniprot.org/uniprot/P0AFU8 P0AFU8]
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** [http://www.uniprot.org/uniprot/P38145 P38145]
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** [http://www.uniprot.org/uniprot/Q55532 Q55532]
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** [http://www.uniprot.org/uniprot/P73527 P73527]
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** [http://www.uniprot.org/uniprot/Q44680 Q44680]
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** [http://www.uniprot.org/uniprot/Q44681 Q44681]
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** [http://www.uniprot.org/uniprot/P50854 P50854]
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** [http://www.uniprot.org/uniprot/P50856 P50856]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=riboflavin synthase}}
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{{#set: ec-number=ec-2.5.1.9}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RIBOFLAVIN-SYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • riboflavin synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants):
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6167, flavin biosynthesis II (archaea):
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi):
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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