Difference between revisions of "RIBOFLAVIN-SYN-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14796 RXN-14796] == * direction: ** left-to-right * common-name: ** acyl-coa oxidase ** fatty a...") |
(Created page with "Category:reaction == Reaction RXN-15829 == * direction: ** left-to-right * common-name: ** ubiquinol-cytochrome-c reductase ** ubiquinol--cytochrome-c reductase * ec-numbe...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-15829 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** ubiquinol-cytochrome-c reductase |
| − | ** | + | ** ubiquinol--cytochrome-c reductase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/1.10.2.2 ec-1.10.2.2] |
== Reaction formula == | == Reaction formula == | ||
| − | * | + | * 4 [[PROTON]][c] '''+''' 2 [[Reduced-CycA1-cytochromes]][e] '''+''' 1 [[Ubiquinones]][c] '''=>''' 2 [[Oxidized-CycA1-cytochromes]][e] '''+''' 2 [[PROTON]][e] '''+''' 1 [[Ubiquinols]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ16637]] |
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ13715]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
| − | + | * Gene: [[SJ03106]] | |
| − | |||
| − | * Gene: [[ | ||
| − | |||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-6692]], Fe(II) oxidation: |
| − | ** ''' | + | ** '''3''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | |||
== External links == | == External links == | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=ubiquinol-cytochrome-c reductase|ubiquinol--cytochrome-c reductase}} |
| − | {{#set: ec-number=ec-1. | + | {{#set: ec-number=ec-1.10.2.2}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=3}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 20:43, 18 December 2020
Contents
Reaction RXN-15829
- direction:
- left-to-right
- common-name:
- ubiquinol-cytochrome-c reductase
- ubiquinol--cytochrome-c reductase
- ec-number:
Reaction formula
- 4 PROTON[c] + 2 Reduced-CycA1-cytochromes[e] + 1 Ubiquinones[c] => 2 Oxidized-CycA1-cytochromes[e] + 2 PROTON[e] + 1 Ubiquinols[c]
Gene(s) associated with this reaction
- Gene: SJ16637
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ13715
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ03106
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-6692, Fe(II) oxidation:
- 3 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
