Difference between revisions of "RIBOFLAVINSYNREDUC-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NADPYROPHOSPHAT-RXN NADPYROPHOSPHAT-RXN] == * direction: ** left-to-right * common-name: ** nad+ di...")
(Created page with "Category:reaction == Reaction RIBOFLAVINSYNREDUC-RXN == * direction: ** left-to-right * common-name: ** 5-amino-6-(5-phosphoribosylamino)uracil reductase * ec-number: ** [...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NADPYROPHOSPHAT-RXN NADPYROPHOSPHAT-RXN] ==
+
== Reaction RIBOFLAVINSYNREDUC-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nad+ diphosphatase
+
** 5-amino-6-(5-phosphoribosylamino)uracil reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.1.22 ec-3.6.1.22]
+
** [http://enzyme.expasy.org/EC/1.1.1.193 ec-1.1.1.193]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[CPD-602]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-1086]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22529]]
+
* Gene: [[SJ22508]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02182]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17550]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III (to nicotinamide riboside): [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II]
+
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7761]], NAD salvage pathway II (PNC IV cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7761 PWY-7761]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
 
−
** '''6''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR95898
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11801 11801]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17847 17847]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00103 R00103]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03458 R03458]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nad+ diphosphatase}}
+
{{#set: common-name=5-amino-6-(5-phosphoribosylamino)uracil reductase}}
−
{{#set: ec-number=ec-3.6.1.22}}
+
{{#set: ec-number=ec-1.1.1.193}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RIBOFLAVINSYNREDUC-RXN

  • direction:
    • left-to-right
  • common-name:
    • 5-amino-6-(5-phosphoribosylamino)uracil reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants):
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95898
  • RHEA:
  • LIGAND-RXN:





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