Difference between revisions of "RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN"

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(Created page with "Category:reaction == Reaction DIHYDROOROT-RXN == * direction: ** reversible * common-name: ** dihydroorotase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.2.3 ec-3.5.2....")
(Created page with "Category:reaction == Reaction ATP-ADENYLYLTRANSFERASE-RXN == * direction: ** reversible * common-name: ** atp adenylyltransferase * ec-number: ** [http://enzyme.expasy.org...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIHYDROOROT-RXN ==
+
== Reaction ATP-ADENYLYLTRANSFERASE-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** dihydroorotase
+
** atp adenylyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.2.3 ec-3.5.2.3]
+
** [http://enzyme.expasy.org/EC/2.7.7.53 ec-2.7.7.53]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DI-H-OROTATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ADP]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[ADENOSYL-P4]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15949]]
+
* Gene: [[SJ08856]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ17851]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ19150]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12237]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5686]], UMP biosynthesis I:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7790]], UMP biosynthesis II:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7791]], UMP biosynthesis III:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24299 24299]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16577 16577]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01993 R01993]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00126 R00126]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P08955 P08955]
+
** [http://www.uniprot.org/uniprot/P22108 P22108]
−
** [http://www.uniprot.org/uniprot/P27708 P27708]
+
** [http://www.uniprot.org/uniprot/P16550 P16550]
−
** [http://www.uniprot.org/uniprot/Q91437 Q91437]
 
−
** [http://www.uniprot.org/uniprot/Q58885 Q58885]
 
−
** [http://www.uniprot.org/uniprot/Q9PIN6 Q9PIN6]
 
−
** [http://www.uniprot.org/uniprot/P25995 P25995]
 
−
** [http://www.uniprot.org/uniprot/P20051 P20051]
 
−
** [http://www.uniprot.org/uniprot/P06204 P06204]
 
−
** [http://www.uniprot.org/uniprot/P05020 P05020]
 
−
** [http://www.uniprot.org/uniprot/P31301 P31301]
 
−
** [http://www.uniprot.org/uniprot/Q9PNA0 Q9PNA0]
 
−
** [http://www.uniprot.org/uniprot/Q9JVD6 Q9JVD6]
 
−
** [http://www.uniprot.org/uniprot/P46538 P46538]
 
−
** [http://www.uniprot.org/uniprot/P20054 P20054]
 
−
** [http://www.uniprot.org/uniprot/P05990 P05990]
 
−
** [http://www.uniprot.org/uniprot/Q06950 Q06950]
 
−
** [http://www.uniprot.org/uniprot/P72934 P72934]
 
−
** [http://www.uniprot.org/uniprot/P74438 P74438]
 
−
** [http://www.uniprot.org/uniprot/O04904 O04904]
 
−
** [http://www.uniprot.org/uniprot/P72170 P72170]
 
−
** [http://www.uniprot.org/uniprot/O76138 O76138]
 
−
** [http://www.uniprot.org/uniprot/O27199 O27199]
 
−
** [http://www.uniprot.org/uniprot/P48795 P48795]
 
−
</div>
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=dihydroorotase}}
+
{{#set: common-name=atp adenylyltransferase}}
−
{{#set: ec-number=ec-3.5.2.3}}
+
{{#set: ec-number=ec-2.7.7.53}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:27, 15 January 2021

Reaction ATP-ADENYLYLTRANSFERASE-RXN

  • direction:
    • reversible
  • common-name:
    • atp adenylyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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