Difference between revisions of "RNA-LIGASE-ATP-RXN"

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(Created page with "Category:reaction == Reaction RXN-8675 == * direction: ** left-to-right * common-name: ** s-adenosyl-l-methionine:precorrin-1 c-methyltransferase * synonymous: ** uroporph...")
(Created page with "Category:reaction == Reaction FACOAE182 == * direction: ** left-to-right * common-name: ** linoleoyl-coa hydrolase == Reaction formula == * 1.0 CPD-18[h] '''+''' 1.0 [...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8675 ==
+
== Reaction FACOAE182 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** s-adenosyl-l-methionine:precorrin-1 c-methyltransferase
+
** linoleoyl-coa hydrolase
−
* synonymous:
 
−
** uroporphyrinogen methyltransferase
 
−
** uroporphyrinogen-iii methyltransferase
 
−
** s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase
 
−
** sira
 
−
** adenosylmethionine-uroporphyrinogen iii methyltransferase
 
−
** s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)
 
−
** uroporphyrin-iii c-methyltransferase (incorrect)
 
−
** cysg
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-9038]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIHYDROSIROHYDROCHLORIN]][c]
+
* 1.0 [[CPD-18]][h] '''+''' 1.0 [[WATER]][h] '''=>''' 1.0 [[CO-A]][h] '''+''' 1.0 [[LINOLEIC_ACID]][h] '''+''' 1.0 [[PROTON]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12313]]
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* Gene: [[SJ18316]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7376]], cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation):
 
−
** '''2''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
 
−
** '''4''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5196]], factor 430 biosynthesis:
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5194]], siroheme biosynthesis:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21973 21973]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07238 R07238]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=s-adenosyl-l-methionine:precorrin-1 c-methyltransferase}}
+
{{#set: common-name=linoleoyl-coa hydrolase}}
−
{{#set: synonymous=uroporphyrinogen methyltransferase|uroporphyrin-iii c-methyltransferase (incorrect)|uroporphyrinogen-iii methyltransferase|s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase|cysg|sira|adenosylmethionine-uroporphyrinogen iii methyltransferase|s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 11:22, 15 January 2021

Reaction FACOAE182

  • direction:
    • left-to-right
  • common-name:
    • linoleoyl-coa hydrolase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RNA-LIGASE-ATP-RXN&oldid=114900"