Difference between revisions of "RNA-URIDYLYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] == * direction: ** left-to-right * common-na...")
(Created page with "Category:reaction == Reaction RNA-URIDYLYLTRANSFERASE-RXN == * direction: ** reversible * common-name: ** rna uridylyltransferase * ec-number: ** [http://enzyme.expasy.org...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] ==
+
== Reaction RNA-URIDYLYLTRANSFERASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** strictosidine synthase
+
** rna uridylyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.3.2 ec-4.3.3.2]
+
** [http://enzyme.expasy.org/EC/2.7.7.52 ec-2.7.7.52]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[SECOLOGANIN-CPD]][c] '''+''' 1 [[TRYPTAMINE]][c] '''=>''' 1 [[STRICTOSIDINE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[RNA-Holder]][c] '''+''' 1 [[UTP]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[RNA-Holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12255]]
+
* Gene: [[SJ17317]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ12257]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5290]], secologanin and strictosidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290]
 
−
** '''2''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-6326]], camptothecin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR116263
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15013 15013]
+
{{#set: direction=reversible}}
−
* LIGAND-RXN:
+
{{#set: common-name=rna uridylyltransferase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03738 R03738]
+
{{#set: ec-number=ec-2.7.7.52}}
−
* UNIPROT:
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/Q9VAQ9 Q9VAQ9]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P68175 P68175]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P18417 P18417]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P68174 P68174]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=strictosidine synthase}}
 
−
{{#set: ec-number=ec-4.3.3.2}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RNA-URIDYLYLTRANSFERASE-RXN

  • direction:
    • reversible
  • common-name:
    • rna uridylyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR116263





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