Difference between revisions of "RNASE-II-POLY-A-SUBSTRATE-MRNA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIACYLGLYCEROL-LIPASE-RXN TRIACYLGLYCEROL-LIPASE-RXN] == * direction: ** left-to-right * common-na...")
(Created page with "Category:metabolite == Metabolite CPD-286 == * common-name: ** 4,5α-dihydrocortisone * smiles: ** cc34([ch]2([ch]([ch]1(c(c)(c(c(=o)co)(o)cc1)cc(=o)2))cc[ch]3cc(=o)c...")
Line 1: Line 1:
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[[Category:reaction]]
+
[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIACYLGLYCEROL-LIPASE-RXN TRIACYLGLYCEROL-LIPASE-RXN] ==
+
== Metabolite CPD-286 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** triglyceride lipase
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** 4,5α-dihydrocortisone
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** tgl1
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* smiles:
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* ec-number:
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** cc34([ch]2([ch]([ch]1(c(c)(c(c(=o)co)(o)cc1)cc(=o)2))cc[ch]3cc(=o)cc4))
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** [http://enzyme.expasy.org/EC/3.1.1.3 ec-3.1.1.3]
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* inchi-key:
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== Reaction formula ==
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** yclweyibfolmem-fzpgbcfjsa-n
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* 1 [[Triacylglycerides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[1-2-Diglycerides]][c] '''+''' 1 [[Fatty-Acids]][c] '''+''' 1 [[PROTON]][c]
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* molecular-weight:
−
== Gene(s) associated with this reaction  ==
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** 362.465
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to consume the compound ==
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* Gene: [[SJ20891]]
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== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
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* [[CORTISONE-ALPHA-REDUCTASE-RXN]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) of unknown directionality ==
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* Gene: [[SJ11389]]
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{{#set: common-name=4,5&alpha;-dihydrocortisone}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=yclweyibfolmem-fzpgbcfjsa-n}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: molecular-weight=362.465}}
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* Gene: [[SJ22061]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ13501]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ06461]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ20887]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ17350]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20888]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ14819]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ22060]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20890]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20900]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ16425]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20894]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20979]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ12683]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20895]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ22570]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ18635]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ09205]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ20892]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ12478]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ00011]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20898]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20899]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20897]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20884]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20889]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
−
== Pathway(s) ==
 
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* [[LIPAS-PWY]], triacylglycerol degradation: [http://metacyc.org/META/NEW-IMAGE?object=LIPAS-PWY LIPAS-PWY]
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12045 12045]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01369 R01369]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P10335 P10335]
 
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** [http://www.uniprot.org/uniprot/P07867 P07867]
 
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** [http://www.uniprot.org/uniprot/P11150 P11150]
 
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** [http://www.uniprot.org/uniprot/P17892 P17892]
 
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** [http://www.uniprot.org/uniprot/P24484 P24484]
 
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** [http://www.uniprot.org/uniprot/Q9TSB3 Q9TSB3]
 
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** [http://www.uniprot.org/uniprot/P40601 P40601]
 
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** [http://www.uniprot.org/uniprot/P0C0R3 P0C0R3]
 
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** [http://www.uniprot.org/uniprot/Q05489 Q05489]
 
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** [http://www.uniprot.org/uniprot/P81139 P81139]
 
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** [http://www.uniprot.org/uniprot/P17573 P17573]
 
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** [http://www.uniprot.org/uniprot/P16233 P16233]
 
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** [http://www.uniprot.org/uniprot/Q64425 Q64425]
 
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** [http://www.uniprot.org/uniprot/Q29458 Q29458]
 
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** [http://www.uniprot.org/uniprot/Q59537 Q59537]
 
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** [http://www.uniprot.org/uniprot/Q59538 Q59538]
 
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** [http://www.uniprot.org/uniprot/Q59539 Q59539]
 
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** [http://www.uniprot.org/uniprot/P32947 P32947]
 
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** [http://www.uniprot.org/uniprot/P32948 P32948]
 
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** [http://www.uniprot.org/uniprot/P32949 P32949]
 
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** [http://www.uniprot.org/uniprot/P26504 P26504]
 
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** [http://www.uniprot.org/uniprot/P61872 P61872]
 
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** [http://www.uniprot.org/uniprot/Q59932 Q59932]
 
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** [http://www.uniprot.org/uniprot/P61871 P61871]
 
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** [http://www.uniprot.org/uniprot/O66015 O66015]
 
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** [http://www.uniprot.org/uniprot/Q02351 Q02351]
 
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** [http://www.uniprot.org/uniprot/P06857 P06857]
 
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** [http://www.uniprot.org/uniprot/P04634 P04634]
 
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** [http://www.uniprot.org/uniprot/P22394 P22394]
 
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** [http://www.uniprot.org/uniprot/P29605 P29605]
 
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** [http://www.uniprot.org/uniprot/P16386 P16386]
 
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** [http://www.uniprot.org/uniprot/P08658 P08658]
 
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** [http://www.uniprot.org/uniprot/P07098 P07098]
 
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** [http://www.uniprot.org/uniprot/Q9UP41 Q9UP41]
 
−
** [http://www.uniprot.org/uniprot/P24640 P24640]
 
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** [http://www.uniprot.org/uniprot/Q8VC44 Q8VC44]
 
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** [http://www.uniprot.org/uniprot/P54316 P54316]
 
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** [http://www.uniprot.org/uniprot/P29183 P29183]
 
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** [http://www.uniprot.org/uniprot/P20261 P20261]
 
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** [http://www.uniprot.org/uniprot/Q28681 Q28681]
 
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** [http://www.uniprot.org/uniprot/P26876 P26876]
 
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** [http://www.uniprot.org/uniprot/P32946 P32946]
 
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** [http://www.uniprot.org/uniprot/P34163 P34163]
 
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** [http://www.uniprot.org/uniprot/P50903 P50903]
 
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** [http://www.uniprot.org/uniprot/P41365 P41365]
 
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** [http://www.uniprot.org/uniprot/Q02104 Q02104]
 
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** [http://www.uniprot.org/uniprot/Q12616 Q12616]
 
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** [http://www.uniprot.org/uniprot/Q12614 Q12614]
 
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** [http://www.uniprot.org/uniprot/Q59811 Q59811]
 
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** [http://www.uniprot.org/uniprot/P75268 P75268]
 
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** [http://www.uniprot.org/uniprot/Q48992 Q48992]
 
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** [http://www.uniprot.org/uniprot/P78898 P78898]
 
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</div>
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=triglyceride lipase|tgl1}}
 
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{{#set: ec-number=ec-3.1.1.3}}
 
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{{#set: nb gene associated=28}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Revision as of 20:37, 18 December 2020

Metabolite CPD-286

  • common-name:
    • 4,5α-dihydrocortisone
  • smiles:
    • cc34([ch]2([ch]([ch]1(c(c)(c(c(=o)co)(o)cc1)cc(=o)2))cc[ch]3cc(=o)cc4))
  • inchi-key:
    • yclweyibfolmem-fzpgbcfjsa-n
  • molecular-weight:
    • 362.465

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RNASE-II-POLY-A-SUBSTRATE-MRNA&oldid=48391"