Difference between revisions of "RXN-1"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6061 PWY-6061] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-7742 tax-77...")
(Created page with "Category:reaction == Reaction RXN-12750 == * direction: ** left-to-right * common-name: ** 3-[(3as,4s,5r,7as)-5-hydroxy-7a-methyl-1-oxo-octahydro-1h-inden-4-yl]-3-hydroxyp...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6061 PWY-6061] ==
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== Reaction RXN-12750 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-7742 tax-7742]
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** left-to-right
 
* common-name:
 
* common-name:
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** bile acid biosynthesis, neutral pathway
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** 3-[(3as,4s,5r,7as)-5-hydroxy-7a-methyl-1-oxo-octahydro-1h-inden-4-yl]-3-hydroxypropanoate dehydrogenase
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== Reaction(s) found ==
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** 3-hydroxyacyl-coa dehydrogenase
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* [[2.3.1.176-RXN]]
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* ec-number:
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* [[4.2.1.107-RXN]]
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** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
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* [[RXN-9847]]
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== Reaction formula ==
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== Reaction(s) not found ==
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* 1 [[CPD-13757]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-13758]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9797 RXN-9797]
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* Gene: [[SJ16470]]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-N-CHOLOYLTRANSFERASE-RXN GLYCINE-N-CHOLOYLTRANSFERASE-RXN]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.95-RXN 1.14.13.95-RXN]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.181-RXN 1.1.1.181-RXN]
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* Gene: [[SJ17348]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9852 RXN-9852]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9841 RXN-9841]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=CHOLESTANETRIOL-26-MONOOXYGENASE-RXN CHOLESTANETRIOL-26-MONOOXYGENASE-RXN]
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* Gene: [[SJ03584]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9844 RXN-9844]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9796 RXN-9796]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9851 RXN-9851]
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* Gene: [[SJ07211]]
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* [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.29-RXN 6.2.1.29-RXN]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9843 RXN-9843]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=CHOLESTEROL-7-ALPHA-MONOOXYGENASE-RXN CHOLESTEROL-7-ALPHA-MONOOXYGENASE-RXN]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=CHOLESTANETETRAOL-26-DEHYDROGENASE-RXN CHOLESTANETETRAOL-26-DEHYDROGENASE-RXN]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9842 RXN-9842]
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* Gene: [[SJ16180]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9798 RXN-9798]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9848 RXN-9848]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.28-RXN 6.2.1.28-RXN]
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* Gene: [[SJ21390]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9845 RXN-9845]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9850 RXN-9850]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9799 RXN-9799]
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* Gene: [[SJ01444]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.40-RXN 1.2.1.40-RXN]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9794 RXN-9794]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9800 RXN-9800]
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* Gene: [[SJ06127]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9840 RXN-9840]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9846 RXN-9846]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
</div>
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{{#set: taxonomic-range=tax-7742}}
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== Pathway(s)  ==
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{{#set: common-name=bile acid biosynthesis, neutral pathway}}
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* [[PWY-6944]], androstenedione degradation:
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{{#set: nb reaction found=3}}
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** '''2''' reactions found over '''25''' reactions in the full pathway
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{{#set: completion rate=0.1}}
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== Reconstruction information  ==
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{{#set: nb total reaction=29}}
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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{{#set: direction=left-to-right}}
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{{#set: common-name=3-[(3as,4s,5r,7as)-5-hydroxy-7a-methyl-1-oxo-octahydro-1h-inden-4-yl]-3-hydroxypropanoate dehydrogenase|3-hydroxyacyl-coa dehydrogenase}}
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{{#set: ec-number=ec-1.1.1.35}}
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{{#set: nb gene associated=8}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:44, 18 December 2020

Reaction RXN-12750

  • direction:
    • left-to-right
  • common-name:
    • 3-[(3as,4s,5r,7as)-5-hydroxy-7a-methyl-1-oxo-octahydro-1h-inden-4-yl]-3-hydroxypropanoate dehydrogenase
    • 3-hydroxyacyl-coa dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6944, androstenedione degradation:
    • 2 reactions found over 25 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "3-[(3as,4s,5r,7as)-5-hydroxy-7a-methyl-1-oxo-octahydro-1h-inden-4-yl]-3-hydroxypropanoate dehydrogenase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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