Difference between revisions of "RXN-10032"

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(Created page with "Category:reaction == Reaction GLUTAMATE-SYNTHASE-FERREDOXIN-RXN == * direction: ** left-to-right * common-name: ** glutamate synthase (ferredoxin) * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction RXN-10032 == * direction: ** left-to-right * common-name: ** dehydroquinate synthase * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.24 ec...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTAMATE-SYNTHASE-FERREDOXIN-RXN ==
+
== Reaction RXN-10032 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamate synthase (ferredoxin)
+
** dehydroquinate synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.7.1 ec-1.4.7.1]
+
** [http://enzyme.expasy.org/EC/1.4.1.24 ec-1.4.1.24]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 2 [[GLT]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
+
* 1 [[CPD-10792]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04922]]
+
* Gene: [[SJ15385]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04921]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ12700]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13463]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10812]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6549]], L-glutamine biosynthesis III:
+
* [[PWY-6160]], 3-dehydroquinate biosynthesis II (archaea):
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-4341]], L-glutamate biosynthesis V:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6964]], ammonia assimilation cycle II:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR112102
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12130 12130]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25959 25959]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00021 R00021]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08569 R08569]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P23225 P23225]
 
−
** [http://www.uniprot.org/uniprot/O67512 O67512]
 
−
** [http://www.uniprot.org/uniprot/P96218 P96218]
 
−
** [http://www.uniprot.org/uniprot/Q06434 Q06434]
 
−
** [http://www.uniprot.org/uniprot/Q43081 Q43081]
 
−
** [http://www.uniprot.org/uniprot/P55037 P55037]
 
−
** [http://www.uniprot.org/uniprot/Q43155 Q43155]
 
−
** [http://www.uniprot.org/uniprot/Q7M242 Q7M242]
 
−
** [http://www.uniprot.org/uniprot/P51375 P51375]
 
−
** [http://www.uniprot.org/uniprot/P55038 P55038]
 
−
** [http://www.uniprot.org/uniprot/Q9SLM4 Q9SLM4]
 
−
** [http://www.uniprot.org/uniprot/Q08258 Q08258]
 
−
** [http://www.uniprot.org/uniprot/O49154 O49154]
 
−
** [http://www.uniprot.org/uniprot/O19906 O19906]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutamate synthase (ferredoxin)}}
+
{{#set: common-name=dehydroquinate synthase}}
−
{{#set: ec-number=ec-1.4.7.1}}
+
{{#set: ec-number=ec-1.4.1.24}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-10032

  • direction:
    • left-to-right
  • common-name:
    • dehydroquinate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6160, 3-dehydroquinate biosynthesis II (archaea):
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR112102
  • RHEA:
  • LIGAND-RXN:





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