RXN-10059

Reaction CARBPSYN-RXN

• direction:
  • left-to-right
• common-name:
  • carbamoyl phosphate synthetase
• ec-number:
  • ec-6.3.5.5

Reaction formula

• 2 ATP[c] + 1 GLN[c] + 1 HCO3[c] + 1 WATER[c] => 2 ADP[c] + 1 CARBAMOYL-P[c] + 1 GLT[c] + 2 PROTON[c] + 1 Pi[c]

Gene(s) associated with this reaction

• Gene: SJ17851
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: SJ15949
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a

Pathway(s)

• PWY-7400, L-arginine biosynthesis IV (archaebacteria): PWY-7400
  • 7 reactions found over 9 reactions in the full pathway
• ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine): ARGSYN-PWY
  • 5 reactions found over 4 reactions in the full pathway
• ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle): ARGSYNBSUB-PWY
  • 9 reactions found over 9 reactions in the full pathway
• PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline): PWY-5154
  • 8 reactions found over 9 reactions in the full pathway
• PWY-5686, UMP biosynthesis I: PWY-5686
  • 6 reactions found over 6 reactions in the full pathway
• PWY-7790, UMP biosynthesis II: PWY-7790
  • 5 reactions found over 6 reactions in the full pathway
• PWY-7791, UMP biosynthesis III: PWY-7791
  • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

• category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
• category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
• category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a

External links

• RHEA:
  • 18634
• LIGAND-RXN:
  • R00575
• UNIPROT:
  • P08955
  • P13258
  • P38099
  • P27708
  • Q91437
  • O28994
  • P57689
  • P38098
  • Q9WZ27
  • Q9PMG8
  • Q9JXW8
  • Q9JVZ6
  • P25993
  • Q9PIL7
  • P25994
  • Q9JW02
  • O25577
  • P52557
  • P46537
  • P18185
  • P07259
  • P20054
  • P05990
  • P14845
  • Q06950
  • Q92115
  • Q09794
  • P03965
  • P07258
  • P00968
  • P0A6F1
  • P93345
  • Q27732
  • Q27448
  • O50236
  • O94313
  • Q59968
  • Q59969
  • O50301
  • O50302