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| − | [[Category:reaction]] | + | [[Category:pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1391 PWY0-1391] == |
| − | * direction: | + | * taxonomic-range: |
| − | ** reversible | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] |
| | * common-name: | | * common-name: |
| − | ** 3-hydroxyadipyl-coa dehydrogenase | + | ** s-methyl-5'-thioadenosine degradation iv |
| − | ** 3-hydroxyacyl-coa dehydrogenase
| + | == Reaction(s) found == |
| − | * ec-number:
| + | * [[METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN]] |
| − | ** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
| + | == Reaction(s) not found == |
| − | == Reaction formula == | + | All reactions of this pathways are in present |
| − | * 1 [[3-HYDROXYADIPYL-COA]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-KETO-ADIPYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
| + | {{#set: taxonomic-range=tax-2}} |
| − | == Gene(s) associated with this reaction ==
| + | {{#set: common-name=s-methyl-5'-thioadenosine degradation iv}} |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | {{#set: nb reaction found=1}} |
| − | * Gene: [[SJ21390]] | + | {{#set: completion rate=1.0}} |
| − | ** Category: [[annotation]]
| + | {{#set: nb total reaction=1}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ07211]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[SJ03584]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[SJ17348]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ06127]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ16470]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ16180]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ01444]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | </div>
| |
| − | == Pathway(s) == | |
| − | * [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321]
| |
| − | ** '''2''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361]
| |
| − | ** '''2''' reactions found over '''7''' reactions in the full pathway
| |
| − | == Reconstruction information ==
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | == External links ==
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34854 34854]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R06941 R06941]
| |
| − | {{#set: direction=reversible}} | |
| − | {{#set: common-name=3-hydroxyadipyl-coa dehydrogenase|3-hydroxyacyl-coa dehydrogenase}} | |
| − | {{#set: ec-number=ec-1.1.1.35}} | |
| − | {{#set: nb gene associated=8}} | |
| − | {{#set: nb pathway associated=2}} | |
| − | {{#set: reconstruction category=orthology|annotation}}
| |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
| |
