Difference between revisions of "RXN-10608"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15561 RXN-15561] == * direction: ** left-to-right * common-name: ** ring-type e3 ubiquitin tran...")
 
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6788 PWY-6788] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-47...")
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[[Category:reaction]]
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[[Category:pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15561 RXN-15561] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6788 PWY-6788] ==
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* direction:
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* taxonomic-range:
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
 
* common-name:
 
* common-name:
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** ring-type e3 ubiquitin transferase
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** cellulose degradation ii (fungi)
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* ec-number:
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== Reaction(s) found ==
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** [http://enzyme.expasy.org/EC/2.3.2.27 ec-2.3.2.27]
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* [[3.2.1.91-RXN]]
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== Reaction formula ==
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* [[RXN-10773]]
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* 1 [[Protein-L-lysine]][c] '''+''' 1 [[S-ubiquitinyl-UCP-E2-L-cysteine]][c] '''=>''' 1 [[PROTEIN-N-UBIQUITYL-LYSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Ubiquitin-carrier-protein-E2-L-cysteine]][c]
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* [[RXN-2043]]
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== Gene(s) associated with this reaction  ==
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== Reaction(s) not found ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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All reactions of this pathways are in present
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* Gene: [[SJ00972]]
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{{#set: taxonomic-range=tax-4751}}
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** Category: [[annotation]]
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{{#set: common-name=cellulose degradation ii (fungi)}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction found=3}}
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* Gene: [[SJ04102]]
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{{#set: completion rate=1.0}}
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** Category: [[annotation]]
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{{#set: nb total reaction=3}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ06176]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ00621]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ03727]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ05626]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ02273]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ03975]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ04324]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ21686]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ11122]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ19061]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ21688]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ19253]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ21572]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ15828]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ15544]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ02711]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ00056]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ11923]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ08227]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ22546]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ04322]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ17070]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ03726]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ09000]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ14203]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ04560]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ06254]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ00781]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ06991]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ01880]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ13742]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ07233]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ22265]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ06296]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ15797]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ06602]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ12138]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ02681]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ17379]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ07569]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ12854]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ02709]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ07902]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
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== Pathway(s) ==
 
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* [[PWY-7511]], protein ubiquitination: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== External links  ==
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=ring-type e3 ubiquitin transferase}}
 
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{{#set: ec-number=ec-2.3.2.27}}
 
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{{#set: nb gene associated=45}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 14:29, 26 August 2019

Pathway PWY-6788

  • taxonomic-range:
  • common-name:
    • cellulose degradation ii (fungi)

Reaction(s) found

Reaction(s) not found

All reactions of this pathways are in present



Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-10608&oldid=24621"