Difference between revisions of "RXN-10616"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13227 RXN-13227] == * direction: ** left-to-right == Reaction formula == * 1 N-terminal-PPK...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLUCMUT-RXN PHOSPHOGLUCMUT-RXN] == * direction: ** reversible * common-name: ** phosphogluco...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLUCMUT-RXN PHOSPHOGLUCMUT-RXN] == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
+ | * common-name: | ||
+ | ** phosphoglucomutase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/5.4.2.2 ec-5.4.2.2] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[GLC-1-P]][c] '''<=>''' 1 [[D-glucopyranose-6-phosphate]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ05004]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ18341]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ12510]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ02279]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ12467]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[PWY-6737]], starch degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6737 PWY-6737] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238] | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOGENSYNTH-PWY GLYCOGENSYNTH-PWY] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7900]], glycogen biosynthesis III (from α-maltose 1-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7900 PWY-7900] | ||
+ | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-6731]], starch degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6731 PWY-6731] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5941]], glycogen degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5941 PWY-5941] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY] | ||
+ | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-622]], starch biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-622 PWY-622] | ||
+ | ** '''2''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-2723]], trehalose degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7343]], UDP-α-D-glucose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7343 PWY-7343] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5940]], streptomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5940 PWY-5940] | ||
+ | ** '''2''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-7902]], glucosylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7902 PWY-7902] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5384 PWY-5384] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | </div> | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: nb gene associated= | + | * RHEA: |
− | {{#set: nb pathway associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23539 23539] |
− | {{#set: reconstruction category=annotation}} | + | * PIR: |
− | {{#set: reconstruction tool=pathwaytools}} | + | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41801 A41801] |
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A53614 A53614] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B53614 B53614] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E70650 E70650] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64803 G64803] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G81947 G81947] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I39487 I39487] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I41215 I41215] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRB PMRB] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRBI PMRBI] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRT PMRT] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S10741 S10741] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S39397 S39397] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41199 S41199] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41200 S41200] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S76847 S76847] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78440 S78440] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04326 T04326] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04327 T04327] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T12574 T12574] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52656 T52656] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P36871 P36871] | ||
+ | ** [http://www.uniprot.org/uniprot/P40390 P40390] | ||
+ | ** [http://www.uniprot.org/uniprot/P40391 P40391] | ||
+ | ** [http://www.uniprot.org/uniprot/P95090 P95090] | ||
+ | ** [http://www.uniprot.org/uniprot/P36938 P36938] | ||
+ | ** [http://www.uniprot.org/uniprot/P57002 P57002] | ||
+ | ** [http://www.uniprot.org/uniprot/P38569 P38569] | ||
+ | ** [http://www.uniprot.org/uniprot/P31120 P31120] | ||
+ | ** [http://www.uniprot.org/uniprot/P00949 P00949] | ||
+ | ** [http://www.uniprot.org/uniprot/P38652 P38652] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M2K5 Q7M2K5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q16106 Q16106] | ||
+ | ** [http://www.uniprot.org/uniprot/P33401 P33401] | ||
+ | ** [http://www.uniprot.org/uniprot/P37012 P37012] | ||
+ | ** [http://www.uniprot.org/uniprot/P74643 P74643] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51847 Q51847] | ||
+ | ** [http://www.uniprot.org/uniprot/P93804 P93804] | ||
+ | ** [http://www.uniprot.org/uniprot/P93805 P93805] | ||
+ | ** [http://www.uniprot.org/uniprot/P93262 P93262] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SCY0 Q9SCY0] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00959 R00959] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=phosphoglucomutase}} | ||
+ | {{#set: ec-number=ec-5.4.2.2}} | ||
+ | {{#set: nb gene associated=5}} | ||
+ | {{#set: nb pathway associated=18}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 14:25, 26 August 2019
Contents
Reaction PHOSPHOGLUCMUT-RXN
- direction:
- reversible
- common-name:
- phosphoglucomutase
- ec-number:
Reaction formula
- 1 GLC-1-P[c] <=> 1 D-glucopyranose-6-phosphate[c]
Gene(s) associated with this reaction
- Gene: SJ05004
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ18341
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ12510
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ02279
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ12467
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6737, starch degradation V: PWY-6737
- 2 reactions found over 4 reactions in the full pathway
- PWY-7238, sucrose biosynthesis II: PWY-7238
- 5 reactions found over 8 reactions in the full pathway
- GLYCOGENSYNTH-PWY, glycogen biosynthesis I (from ADP-D-Glucose): GLYCOGENSYNTH-PWY
- 1 reactions found over 4 reactions in the full pathway
- GLUCOSE1PMETAB-PWY, glucose and glucose-1-phosphate degradation: GLUCOSE1PMETAB-PWY
- 3 reactions found over 5 reactions in the full pathway
- PWY-7900, glycogen biosynthesis III (from α-maltose 1-phosphate): PWY-7900
- 2 reactions found over 8 reactions in the full pathway
- PWY-6731, starch degradation III: PWY-6731
- 2 reactions found over 4 reactions in the full pathway
- PWY-5941, glycogen degradation II: PWY-5941
- 3 reactions found over 6 reactions in the full pathway
- GLYCOCAT-PWY, glycogen degradation I: GLYCOCAT-PWY
- 6 reactions found over 8 reactions in the full pathway
- PWY-622, starch biosynthesis: PWY-622
- 2 reactions found over 10 reactions in the full pathway
- PWY-6317, D-galactose degradation I (Leloir pathway): PWY-6317
- 5 reactions found over 5 reactions in the full pathway
- PWY-2723, trehalose degradation V: PWY-2723
- 2 reactions found over 3 reactions in the full pathway
- PWY-3801, sucrose degradation II (sucrose synthase): PWY-3801
- 4 reactions found over 5 reactions in the full pathway
- PWY-7343, UDP-α-D-glucose biosynthesis I: PWY-7343
- 2 reactions found over 2 reactions in the full pathway
- PWY-5940, streptomycin biosynthesis: PWY-5940
- 2 reactions found over 18 reactions in the full pathway
- PWY-7902, glucosylglycerol biosynthesis: PWY-7902
- 2 reactions found over 5 reactions in the full pathway
- PWY-5384, sucrose degradation IV (sucrose phosphorylase): PWY-5384
- 3 reactions found over 4 reactions in the full pathway
- PWY-5661, GDP-glucose biosynthesis: PWY-5661
- 2 reactions found over 3 reactions in the full pathway
- PWY66-422, D-galactose degradation V (Leloir pathway): PWY66-422
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
- PIR:
- UNIPROT:
- LIGAND-RXN: