Difference between revisions of "RXN-10700"

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(Created page with "Category:reaction == Reaction URATE-OXIDASE-RXN == * direction: ** left-to-right * common-name: ** factor-independent urate hydroxylase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction RXN-14918 == * direction: ** left-to-right * common-name: ** γ-tocotrienol methyltransferase * ec-number: ** [http://enzyme.expasy.org/...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction URATE-OXIDASE-RXN ==
+
== Reaction RXN-14918 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** factor-independent urate hydroxylase
+
** γ-tocotrienol methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.7.3.3 ec-1.7.3.3]
+
** [http://enzyme.expasy.org/EC/2.1.1.95 ec-2.1.1.95]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[URATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[5-HYDROXYISOURATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
* 1 [[CPD-15838]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-15836]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00979]]
+
* Gene: [[SJ10416]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19970]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5691]], urate conversion to allantoin I:
+
* [[PWY-7436]], vitamin E biosynthesis (tocotrienols):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21369 21369]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02106 R02106]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P04670 P04670]
 
−
** [http://www.uniprot.org/uniprot/P16163 P16163]
 
−
** [http://www.uniprot.org/uniprot/Q00511 Q00511]
 
−
** [http://www.uniprot.org/uniprot/P33282 P33282]
 
−
** [http://www.uniprot.org/uniprot/P25688 P25688]
 
−
** [http://www.uniprot.org/uniprot/P16164 P16164]
 
−
** [http://www.uniprot.org/uniprot/Q45697 Q45697]
 
−
** [http://www.uniprot.org/uniprot/P78609 P78609]
 
−
** [http://www.uniprot.org/uniprot/P09118 P09118]
 
−
** [http://www.uniprot.org/uniprot/P11645 P11645]
 
−
** [http://www.uniprot.org/uniprot/P23194 P23194]
 
−
** [http://www.uniprot.org/uniprot/P34799 P34799]
 
−
** [http://www.uniprot.org/uniprot/P34798 P34798]
 
−
** [http://www.uniprot.org/uniprot/P53763 P53763]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=factor-independent urate hydroxylase}}
+
{{#set: common-name=γ-tocotrienol methyltransferase}}
−
{{#set: ec-number=ec-1.7.3.3}}
+
{{#set: ec-number=ec-2.1.1.95}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:00, 14 January 2021

Reaction RXN-14918

  • direction:
    • left-to-right
  • common-name:
    • γ-tocotrienol methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7436, vitamin E biosynthesis (tocotrienols):
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-10700&oldid=101153"