Difference between revisions of "RXN-10711"

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(Created page with "Category:reaction == Reaction DAPASYN-RXN == * direction: ** reversible * common-name: ** 7,8-diaminopelargonic acid synthase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction RXN-8790 == * direction: ** reversible * common-name: ** dihydrogeranylgeranyl-bacteriochlorophyll a reductase == Reaction formula == * 1 C...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DAPASYN-RXN ==
+
== Reaction RXN-8790 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** 7,8-diaminopelargonic acid synthase
+
** dihydrogeranylgeranyl-bacteriochlorophyll a reductase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.6.1.62 ec-2.6.1.62]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''<=>''' 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE]][c]
+
* 1 [[CPD-9090]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[CPD-9089]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14599]]
+
* Gene: [[SJ15264]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I:
+
* [[PWY-5526]], bacteriochlorophyll a biosynthesis:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR122486
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16864 16864]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03231 R03231]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q58696 Q58696]
 
−
** [http://www.uniprot.org/uniprot/P53555 P53555]
 
−
** [http://www.uniprot.org/uniprot/P44426 P44426]
 
−
** [http://www.uniprot.org/uniprot/Q9JV96 Q9JV96]
 
−
** [http://www.uniprot.org/uniprot/Q9PIJ2 Q9PIJ2]
 
−
** [http://www.uniprot.org/uniprot/P46395 P46395]
 
−
** [http://www.uniprot.org/uniprot/P53656 P53656]
 
−
** [http://www.uniprot.org/uniprot/P22805 P22805]
 
−
** [http://www.uniprot.org/uniprot/P45488 P45488]
 
−
** [http://www.uniprot.org/uniprot/P12995 P12995]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=7,8-diaminopelargonic acid synthase}}
+
{{#set: common-name=dihydrogeranylgeranyl-bacteriochlorophyll a reductase}}
−
{{#set: ec-number=ec-2.6.1.62}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:37, 15 March 2021

Reaction RXN-8790

  • direction:
    • reversible
  • common-name:
    • dihydrogeranylgeranyl-bacteriochlorophyll a reductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5526, bacteriochlorophyll a biosynthesis:
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122486





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