Difference between revisions of "RXN-10821"

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(Created page with "Category:reaction == Reaction RXN-16030 == * direction: ** reversible * common-name: ** phosphatidate phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.4 ec-3...")
(Created page with "Category:reaction == Reaction RXN-13186 == * direction: ** left-to-right * common-name: ** histone demethylase activity (h3-k36 specific) * ec-number: ** [http://enzyme.ex...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16030 ==
+
== Reaction RXN-13186 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphatidate phosphatase
+
** histone demethylase activity (h3-k36 specific)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.4 ec-3.1.3.4]
+
** [http://enzyme.expasy.org/EC/1.14.11.27 ec-1.14.11.27]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-17273]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CPD-17271]][c] '''+''' 1 [[Pi]][c]
+
* 2 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-8900]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 2 [[FORMALDEHYDE]][c] '''+''' 1 [[Protein-L-lysine]][c] '''+''' 2 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07066]]
+
* Gene: [[SJ19102]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21389]]
+
* Gene: [[SJ18735]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21676]]
+
* Gene: [[SJ13421]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ13957]]
+
* Gene: [[SJ05371]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ07984]]
+
* Gene: [[SJ19354]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00708]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: common-name=phosphatidate phosphatase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42033 42033]
−
{{#set: ec-number=ec-3.1.3.4}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=5}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R10056 R10056]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=histone demethylase activity (h3-k36 specific)}}
 +
{{#set: ec-number=ec-1.14.11.27}}
 +
{{#set: nb gene associated=6}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Revision as of 11:27, 15 January 2021

Reaction RXN-13186

  • direction:
    • left-to-right
  • common-name:
    • histone demethylase activity (h3-k36 specific)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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