Difference between revisions of "RXN-10821"

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(Created page with "Category:reaction == Reaction RXN-13186 == * direction: ** left-to-right * common-name: ** histone demethylase activity (h3-k36 specific) * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction GLUCURONATE-REDUCTASE-RXN == * direction: ** left-to-right * common-name: ** l-glucuronate reductase * ec-number: ** [http://enzyme.expasy.or...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-13186 ==
+
== Reaction GLUCURONATE-REDUCTASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** histone demethylase activity (h3-k36 specific)
+
** l-glucuronate reductase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.14.11.27 ec-1.14.11.27]
+
** [http://enzyme.expasy.org/EC/1.1.1.19 ec-1.1.1.19]
 
== Reaction formula ==
 
== Reaction formula ==
* 2 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-8900]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 2 [[FORMALDEHYDE]][c] '''+''' 1 [[Protein-L-lysine]][c] '''+''' 2 [[SUC]][c]
+
* 1 [[CPD-15530]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-GULONATE]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ19102]]
+
* Gene: [[SJ05644]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ18735]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ13421]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ05371]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ19354]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ00708]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5525]], D-glucuronate degradation I:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY3DJ-35471]], L-ascorbate biosynthesis IV (animals, D-glucuronate pathway):
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115924
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42033 42033]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14911 14911]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R10056 R10056]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01481 R01481]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=histone demethylase activity (h3-k36 specific)}}
+
{{#set: common-name=l-glucuronate reductase}}
{{#set: ec-number=ec-1.14.11.27}}
+
{{#set: ec-number=ec-1.1.1.19}}
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:40, 15 March 2021

Reaction GLUCURONATE-REDUCTASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • l-glucuronate reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5525, D-glucuronate degradation I:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY3DJ-35471, L-ascorbate biosynthesis IV (animals, D-glucuronate pathway):
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115924
  • RHEA:
  • LIGAND-RXN: