Difference between revisions of "RXN-10821"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-201174 tax-...") |
(Created page with "Category:reaction == Reaction RXN-13186 == * direction: ** left-to-right * common-name: ** histone demethylase activity (h3-k36 specific) * ec-number: ** [http://enzyme.ex...") |
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| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction RXN-13186 == |
| − | * | + | * direction: |
| − | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
| − | ** | + | ** histone demethylase activity (h3-k36 specific) |
| − | == Reaction(s) | + | * ec-number: |
| − | * [[ | + | ** [http://enzyme.expasy.org/EC/1.14.11.27 ec-1.14.11.27] |
| − | * [[ | + | == Reaction formula == |
| − | * [[ | + | * 2 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-8900]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 2 [[FORMALDEHYDE]][c] '''+''' 1 [[Protein-L-lysine]][c] '''+''' 2 [[SUC]][c] |
| − | * [[ | + | == Gene(s) associated with this reaction == |
| − | * [[ | + | * Gene: [[SJ18735]] |
| − | * [[ | + | ** Category: [[annotation]] |
| − | * [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * [[ | + | * Gene: [[SJ13421]] |
| − | * [[ | + | ** Category: [[annotation]] |
| − | * [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * [[ | + | * Gene: [[SJ05371]] |
| − | * [[ | + | ** Category: [[annotation]] |
| − | == | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * [ | + | * Gene: [[SJ19354]] |
| − | * [http:// | + | ** Category: [[annotation]] |
| − | * [http:// | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
| − | {{#set: | + | * Gene: [[SJ00708]] |
| − | {{#set: | + | ** Category: [[annotation]] |
| − | {{#set: nb | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
| − | {{#set: | + | * Gene: [[SJ19102]] |
| − | {{#set: | + | ** Category: [[annotation]] |
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | == Pathway(s) == | ||
| + | == Reconstruction information == | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42033 42033] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R10056 R10056] | ||
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: common-name=histone demethylase activity (h3-k36 specific)}} | ||
| + | {{#set: ec-number=ec-1.14.11.27}} | ||
| + | {{#set: nb gene associated=6}} | ||
| + | {{#set: nb pathway associated=0}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 20:47, 18 December 2020
Contents
Reaction RXN-13186
- direction:
- left-to-right
- common-name:
- histone demethylase activity (h3-k36 specific)
- ec-number:
Reaction formula
- 2 2-KETOGLUTARATE[c] + 1 CPD-8900[c] + 2 OXYGEN-MOLECULE[c] + 1 PROTON[c] => 2 CARBON-DIOXIDE[c] + 2 FORMALDEHYDE[c] + 1 Protein-L-lysine[c] + 2 SUC[c]
Gene(s) associated with this reaction
- Gene: SJ18735
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ13421
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ05371
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ19354
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ00708
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ19102
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
