Difference between revisions of "RXN-10907"

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(Created page with "Category:reaction == Reaction R145-RXN == * direction: ** left-to-right * common-name: ** methylthioribulose 1-phosphate dehydratase * ec-number: ** [http://enzyme.expasy....")
(Created page with "Category:reaction == Reaction RXN0-6525 == * direction: ** left-to-right * common-name: ** rnase bn exoribonuclease * ec-number: ** [http://enzyme.expasy.org/EC/3.1.13.1 e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction R145-RXN ==
+
== Reaction RXN0-6525 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** methylthioribulose 1-phosphate dehydratase
+
** rnase bn exoribonuclease
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.1.109 ec-4.2.1.109]
+
** [http://enzyme.expasy.org/EC/3.1.13.1 ec-3.1.13.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-1063]][c] '''=>''' 1 [[CPD-8999]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[MUTATED-TRNA]][c] '''+''' n [[WATER]][c] '''=>''' n [[Nucleoside-Monophosphates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17981]]
+
* Gene: [[SJ19616]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-4361]], S-methyl-5-thio-α-D-ribose 1-phosphate degradation I:
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15550 15550]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07392 R07392]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=methylthioribulose 1-phosphate dehydratase}}
+
{{#set: common-name=rnase bn exoribonuclease}}
{{#set: ec-number=ec-4.2.1.109}}
+
{{#set: ec-number=ec-3.1.13.1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:03, 14 January 2021

Reaction RXN0-6525

  • direction:
    • left-to-right
  • common-name:
    • rnase bn exoribonuclease
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links