Difference between revisions of "RXN-10947"

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(Created page with "Category:reaction == Reaction METHIONINE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** methionine-trna ligase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction 2.7.1.140-RXN == * direction: ** left-to-right * common-name: ** inositol 1,3,4,6-tetrakisphosphate 5-kinase * ec-number: ** [http://enzyme.e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction METHIONINE--TRNA-LIGASE-RXN ==
+
== Reaction 2.7.1.140-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** methionine-trna ligase
+
** inositol 1,3,4,6-tetrakisphosphate 5-kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.1.1.10 ec-6.1.1.10]
+
** [http://enzyme.expasy.org/EC/2.7.1.140 ec-2.7.1.140]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[Elongation-tRNAMet]][c] '''+''' 1 [[MET]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-MET-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-505]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-1107]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ22245]]
−
* Gene: [[SJ10034]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03581]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ14459]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21346]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04411]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ10455]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ15542]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging:
+
* [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6372]], 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium):
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6554]], 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3):
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6365]], D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6366]], D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13482 13482]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12718 12718]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03659 R03659]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03478 R03478]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P56127 P56127]
 
−
** [http://www.uniprot.org/uniprot/Q44951 Q44951]
 
−
** [http://www.uniprot.org/uniprot/P47267 P47267]
 
−
** [http://www.uniprot.org/uniprot/O84035 O84035]
 
−
** [http://www.uniprot.org/uniprot/O28819 O28819]
 
−
** [http://www.uniprot.org/uniprot/O58721 O58721]
 
−
** [http://www.uniprot.org/uniprot/O83776 O83776]
 
−
** [http://www.uniprot.org/uniprot/O33925 O33925]
 
−
** [http://www.uniprot.org/uniprot/Q58659 Q58659]
 
−
** [http://www.uniprot.org/uniprot/O66738 O66738]
 
−
** [http://www.uniprot.org/uniprot/Q9ZCP0 Q9ZCP0]
 
−
** [http://www.uniprot.org/uniprot/Q9PP85 Q9PP85]
 
−
** [http://www.uniprot.org/uniprot/O26687 O26687]
 
−
** [http://www.uniprot.org/uniprot/O67298 O67298]
 
−
** [http://www.uniprot.org/uniprot/Q9JWP0 Q9JWP0]
 
−
** [http://www.uniprot.org/uniprot/Q9ZKG9 Q9ZKG9]
 
−
** [http://www.uniprot.org/uniprot/Q9Z959 Q9Z959]
 
−
** [http://www.uniprot.org/uniprot/Q9CHE0 Q9CHE0]
 
−
** [http://www.uniprot.org/uniprot/P43828 P43828]
 
−
** [http://www.uniprot.org/uniprot/P56192 P56192]
 
−
** [http://www.uniprot.org/uniprot/Q50319 Q50319]
 
−
** [http://www.uniprot.org/uniprot/P23920 P23920]
 
−
** [http://www.uniprot.org/uniprot/P75091 P75091]
 
−
** [http://www.uniprot.org/uniprot/Q55729 Q55729]
 
−
** [http://www.uniprot.org/uniprot/P22438 P22438]
 
−
** [http://www.uniprot.org/uniprot/P00958 P00958]
 
−
** [http://www.uniprot.org/uniprot/P00959 P00959]
 
−
** [http://www.uniprot.org/uniprot/Q9M2T9 Q9M2T9]
 
−
** [http://www.uniprot.org/uniprot/O23761 O23761]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=methionine-trna ligase}}
+
{{#set: common-name=inositol 1,3,4,6-tetrakisphosphate 5-kinase}}
−
{{#set: ec-number=ec-6.1.1.10}}
+
{{#set: ec-number=ec-2.7.1.140}}
−
{{#set: nb gene associated=7}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=5}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:25, 15 January 2021

Reaction 2.7.1.140-RXN

  • direction:
    • left-to-right
  • common-name:
    • inositol 1,3,4,6-tetrakisphosphate 5-kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6362, 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6372, 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6554, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6365, D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6366, D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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