Difference between revisions of "RXN-10948"

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(Created page with "Category:reaction == Reaction RXN-1121 == * direction: ** left-to-right == Reaction formula == * 1 FERULIC-ACID[c] '''+''' 1 NADPH[c] '''+''' 1 OXYGEN-MOLECULE...")
(Created page with "Category:reaction == Reaction ARYLFORMAMIDASE-RXN == * direction: ** left-to-right * common-name: ** kynurenine formamidase * ec-number: ** [http://enzyme.expasy.org/EC/3....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-1121 ==
+
== Reaction ARYLFORMAMIDASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** kynurenine formamidase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/3.5.1.9 ec-3.5.1.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[FERULIC-ACID]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[5-HYDROXY-FERULIC-ACID]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[N-FORMYLKYNURENINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-14736]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ22183]]
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* Gene: [[SJ11348]]
+
** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09087]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11349]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ05072]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18900]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11355]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-2181]], free phenylpropanoid acid biosynthesis:
+
* [[PWY-7717]], 3-hydroxy-4-methyl-anthranilate biosynthesis I:
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[TRPCAT-PWY]], L-tryptophan degradation I (via anthranilate):
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7765]], 3-hydroxy-4-methyl-anthranilate biosynthesis II:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine):
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13010 13010]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07440 R07440]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01959 R01959]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=6}}
+
{{#set: common-name=kynurenine formamidase}}
−
{{#set: nb pathway associated=1}}
+
{{#set: ec-number=ec-3.5.1.9}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: nb pathway associated=5}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:36, 5 January 2021

Reaction ARYLFORMAMIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • kynurenine formamidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7717, 3-hydroxy-4-methyl-anthranilate biosynthesis I:
    • 3 reactions found over 6 reactions in the full pathway
  • TRPCAT-PWY, L-tryptophan degradation I (via anthranilate):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5651, L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7765, 3-hydroxy-4-methyl-anthranilate biosynthesis II:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6309, L-tryptophan degradation XI (mammalian, via kynurenine):
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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