Difference between revisions of "RXN-10965"

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(Created page with "Category:reaction == Reaction RXN-13162 == * direction: ** left-to-right * common-name: ** squalene synthase ** farnesyl-diphosphate farnesyltransferase * ec-number: ** [h...")
(Created page with "Category:reaction == Reaction RXN-13313 == * direction: ** left-to-right * common-name: ** phosphatidylglycerophosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-13162 ==
+
== Reaction RXN-13313 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** squalene synthase
+
** phosphatidylglycerophosphatase
** farnesyl-diphosphate farnesyltransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.5.1.21 ec-2.5.1.21]
+
** [http://enzyme.expasy.org/EC/3.1.3.27 ec-3.1.3.27]
 
== Reaction formula ==
 
== Reaction formula ==
* 2 [[FARNESYL-PP]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 2 [[PPI]][c] '''+''' 1 [[SQUALENE]][c]
+
* 1 [[CPDQT-520]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-2183]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ02885]]
+
* Gene: [[SJ14627]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* Gene: [[SJ13532]]
+
* Gene: [[SJ19931]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5670]], epoxysqualene biosynthesis:
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R06223 R06223]
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32302 32302]
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32296 32296]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=squalene synthase|farnesyl-diphosphate farnesyltransferase}}
+
{{#set: common-name=phosphatidylglycerophosphatase}}
{{#set: ec-number=ec-2.5.1.21}}
+
{{#set: ec-number=ec-3.1.3.27}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:25, 15 January 2021

Reaction RXN-13313

  • direction:
    • left-to-right
  • common-name:
    • phosphatidylglycerophosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links