Difference between revisions of "RXN-10977"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7796 RXN-7796] == * direction: ** left-to-right * common-name: ** sphingolipid very long chain...")
(Created page with "Category:reaction == Reaction RXN-5286 == * direction: ** left-to-right * common-name: ** 3,8-divinyl-chlorophyllide 8-vinyl reductase * ec-number: ** [http://enzyme.expas...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7796 RXN-7796] ==
+
== Reaction RXN-5286 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** sphingolipid very long chain fatty acid α-hydroxylase
+
** 3,8-divinyl-chlorophyllide 8-vinyl reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.18.7 ec-1.14.18.7]
+
** [http://enzyme.expasy.org/EC/1.3.1.75 ec-1.3.1.75]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD3DJ-82]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[Alpha-hydroxydihydroceramides]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22188]]
+
* Gene: [[SJ12431]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
+
* [[PWY-5086]], chlorophyll a biosynthesis I:
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7760]], bacteriochlorophyll e biosynthesis:
 +
** '''1''' reactions found over '''30''' reactions in the full pathway
 +
* [[PWY-7758]], bacteriochlorophyll d biosynthesis:
 +
** '''1''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7759]], bacteriochlorophyll c biosynthesis:
 +
** '''1''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5064]], chlorophyll a biosynthesis II:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5526]], bacteriochlorophyll a biosynthesis:
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=46513 46513]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14451 14451]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06272 R06272]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=sphingolipid very long chain fatty acid α-hydroxylase}}
+
{{#set: common-name=3,8-divinyl-chlorophyllide 8-vinyl reductase}}
−
{{#set: ec-number=ec-1.14.18.7}}
+
{{#set: ec-number=ec-1.3.1.75}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 20:42, 18 December 2020

Reaction RXN-5286

  • direction:
    • left-to-right
  • common-name:
    • 3,8-divinyl-chlorophyllide 8-vinyl reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5086, chlorophyll a biosynthesis I:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7760, bacteriochlorophyll e biosynthesis:
    • 1 reactions found over 30 reactions in the full pathway
  • PWY-7758, bacteriochlorophyll d biosynthesis:
    • 1 reactions found over 14 reactions in the full pathway
  • PWY-7759, bacteriochlorophyll c biosynthesis:
    • 1 reactions found over 18 reactions in the full pathway
  • PWY-5064, chlorophyll a biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5526, bacteriochlorophyll a biosynthesis:
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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