Difference between revisions of "RXN-10978"

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(Created page with "Category:reaction == Reaction GUANIDINOBUTANAMIDE-NH3-RXN == * direction: ** left-to-right * common-name: ** amidase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.4 e...")
(Created page with "Category:reaction == Reaction 3.1.11.2-RXN == * direction: ** left-to-right * common-name: ** exodeoxyribonuclease iii * ec-number: ** [http://enzyme.expasy.org/EC/3.1.11....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GUANIDINOBUTANAMIDE-NH3-RXN ==
+
== Reaction 3.1.11.2-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** amidase
+
** exodeoxyribonuclease iii
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4]
+
** [http://enzyme.expasy.org/EC/3.1.11.2 ec-3.1.11.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[4-GUANIDO-BUTYRAMIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-592]][c]
+
* 1 [[DNA-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DNA-N]][c] '''+''' 1 [[Deoxy-Ribonucleoside-Monophosphates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16279]]
+
* Gene: [[SJ17332]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ01848]]
+
* Gene: [[SJ04992]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ12684]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ22527]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ11012]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ARGDEG-V-PWY]], L-arginine degradation X (arginine monooxygenase pathway):
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34376 34376]
+
** [http://www.uniprot.org/uniprot/Q9PIP0 Q9PIP0]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/Q9JSY0 Q9JSY0]
−
** [http://www.genome.jp/dbget-bin/www_bget?R03180 R03180]
+
** [http://www.uniprot.org/uniprot/P44318 P44318]
 +
** [http://www.uniprot.org/uniprot/P09030 P09030]
 +
** [http://www.uniprot.org/uniprot/O66261 O66261]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=amidase}}
+
{{#set: common-name=exodeoxyribonuclease iii}}
−
{{#set: ec-number=ec-3.5.1.4}}
+
{{#set: ec-number=ec-3.1.11.2}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:02, 14 January 2021

Reaction 3.1.11.2-RXN

  • direction:
    • left-to-right
  • common-name:
    • exodeoxyribonuclease iii
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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