Difference between revisions of "RXN-10978"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDE-CHOLINEPHOSPHOTRANSFERASE-RXN CERAMIDE-CHOLINEPHOSPHOTRANSFERASE-RXN] == * direction: ** r...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.3-RXN 3.1.26.3-RXN] == * direction: ** left-to-right * common-name: ** ribonuclease iii ** r...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDE-CHOLINEPHOSPHOTRANSFERASE-RXN CERAMIDE-CHOLINEPHOSPHOTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.3-RXN 3.1.26.3-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** ceramide cholinephosphotransferase
+
** ribonuclease iii
 +
** ribonuclease
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.8.3 ec-2.7.8.3]
+
** [http://enzyme.expasy.org/EC/3.1.26.3 ec-3.1.26.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CDP-CHOLINE]][c] '''+''' 1 [[Ceramides]][c] '''<=>''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Sphingomyelins]][c]
+
* 1 [[RNASE-III-MRNA-PROCESSING-SUBSTRATE]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[RNASE-III-PROCESSING-PRODUCT-MRNA]][c] '''+''' 2 [[mRNA-Fragments]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20972]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ17141]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ01852]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ15619]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08973]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17143]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08968]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16273 16273]
+
** [http://www.uniprot.org/uniprot/Q9PM40 Q9PM40]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P51833 P51833]
−
** [http://www.genome.jp/dbget-bin/www_bget?R01891 R01891]
+
** [http://www.uniprot.org/uniprot/Q9CHD0 Q9CHD0]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/Q9JVD3 Q9JVD3]
−
{{#set: common-name=ceramide cholinephosphotransferase}}
+
** [http://www.uniprot.org/uniprot/P44441 P44441]
−
{{#set: ec-number=ec-2.7.8.3}}
+
** [http://www.uniprot.org/uniprot/P0A7Y0 P0A7Y0]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P09155 P09155]
 +
** [http://www.uniprot.org/uniprot/Q52698 Q52698]
 +
** [http://www.uniprot.org/uniprot/Q49034 Q49034]
 +
** [http://www.uniprot.org/uniprot/O69469 O69469]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=ribonuclease iii|ribonuclease}}
 +
{{#set: ec-number=ec-3.1.26.3}}
 +
{{#set: nb gene associated=6}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction 3.1.26.3-RXN

  • direction:
    • left-to-right
  • common-name:
    • ribonuclease iii
    • ribonuclease
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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