Difference between revisions of "RXN-11056"
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(Created page with "Category:reaction == Reaction RXN0-6988 == * direction: ** left-to-right * common-name: ** cytosolic dipeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.13.18 ec-...") |
(Created page with "Category:reaction == Reaction RXN-16042 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.23 ec-2.3.1.23] == Reaction formula == * 1 CP...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-16042 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/3. | + | ** [http://enzyme.expasy.org/EC/2.3.1.23 ec-2.3.1.23] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[CPD- | + | * 1 [[CPD-14394]][c] '''+''' 1 [[Glycerolipids]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17281]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ09127]] |
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ22477]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| + | * Gene: [[SJ13643]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): | ||
| + | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| − | |||
| − | |||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | + | {{#set: ec-number=ec-2.3.1.23}} | |
| − | {{#set: ec-number=ec-3. | + | {{#set: nb gene associated=3}} |
| − | {{#set: nb gene associated= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
| − | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:19, 14 January 2021
Contents
Reaction RXN-16042
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 CPD-14394[c] + 1 Glycerolipids[c] => 1 CO-A[c] + 1 CPD-17281[c]
Gene(s) associated with this reaction
- Gene: SJ09127
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ22477
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ13643
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6958, icosapentaenoate biosynthesis I (lower eukaryotes):
- 5 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
